Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6389 125 6e-24 seq2455 105 6e-18 seq101 82.4 6e-11 >seq6389 Length=1055299 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | ||||| || || |||| || || || || ||| Sbjct 901842 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAG 901783 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| ||| | || || |||| ||| || |||||||||||||| || || || ||||| Sbjct 901782 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCA 901723 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || || ||| | || ||| |||||| | ||||| ||||| Sbjct 901722 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAA 901663 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || ||||| |||||| | || || || |||| ||| | |||||| Sbjct 901662 CATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGGT 901614 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || ||| | Sbjct 902069 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAGC 902010 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || |||||||||||||| || || || || || Sbjct 902009 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 901950 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || |||||||| || ||| | || ||| |||||| | ||||| |||||| Sbjct 901949 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 901890 Query 22399 ATTCAAAAAGAATCCACC 22416 || || ||||| |||||| Sbjct 901889 ATCCAGAAAGAGTCCACC 901872 >seq2455 Length=1213480 Score = 105 bits (116), Expect = 6e-18 Identities = 144/200 (72%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| ||||| || || || | | || || || |||| ||||| || || ||| Sbjct 1041111 AGATGCAGATTTT-GTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTCGAGCCCA 1041169 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || || ||||| ||||| |||||||||||||| || |||| || | Sbjct 1041170 GTGACACCACTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACTTGACC 1041229 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | || |||||||| ||||||||| | |||||| || ||| | |||||| || Sbjct 1041230 AGCAGCACCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCACACTCTTTCCGATCCCA 1041289 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||||| ||||| ||| || Sbjct 1041290 GCATTCAGAAAGAGTCCGCC 1041309 >seq101 Length=337499 Score = 82.4 bits (90), Expect = 6e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 22321 GGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGC 22380 || || ||||| || || || ||||| |||||||| ||||||||| | |||||| |||| Sbjct 283835 GGCATCCCACCTGACCAGCAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGC 283776 Query 22381 ACCGTCTCCGATTACAACATTCAAAAAG 22408 || | || |||||||||||||| |||| Sbjct 283775 ACTCTTTCTGATTACAACATTCAGAAAG 283748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419591049574180