Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6389 194 3e-44 seq2263 154 3e-32 seq2622 111 3e-19 seq2455 100 5e-16 >seq6389 Length=1055299 Score = 194 bits (214), Expect = 3e-44 Identities = 171/211 (81%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || ||||||||||| |||||||| || ||||| || || | ||||||||| Sbjct 901861 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 901920 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||||||||| || || || || || ||||| || || ||||| ||||||||||| Sbjct 901921 AGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 901980 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTT 68431 |||||||||||||| |||||||||||| ||| | || || || | ||||||||| || Sbjct 901981 ATCTTTGCCTTGACATTCTCGATGGTGTC-GCTGGGCTCGACCTCGAGGGTGATGGTCTT 902039 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || |||||||| ||||| ||||||||| Sbjct 902040 GCCAGTCAGGGTCTTCACGAAGATCTGCATT 902070 Score = 192 bits (212), Expect = 1e-43 Identities = 181/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | | ||||| |||||||| || ||||||||||| |||||||| || ||||| Sbjct 901615 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901674 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||||||| | ||||||||| || || || || || || || || || || Sbjct 901675 AAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 901734 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| ||||||||||| |||||||||||||| |||||||||||| ||| | || || Sbjct 901735 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTC-GCTGGGCTCGAC 901793 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || || |||||||| ||||| |||||||| Sbjct 901794 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 901841 >seq2263 Length=894866 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| || ||||| || || | |||||||| Sbjct 850690 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCC 850631 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || || || ||||| || || |||||||| || || || ||||| || || Sbjct 850630 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATCCTGG 850571 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || |||||||||||| | || || |||| ||||||||| || Sbjct 850570 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 850511 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || |||||||| || || || |||||| || Sbjct 850510 CCGGTCAGGGTCTTCACAAAGATTTGCATTTTG 850478 >seq2622 Length=380135 Score = 111 bits (122), Expect = 3e-19 Identities = 122/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 68303 CCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTC 68362 ||||||||| | || |||| ||| || || ||||| | || || || || |||||||| Sbjct 305841 CCCATCTTCCAGCTACTTCTTGGCAAAGATCAGTCTCCGCTGATCAGGAGGGATGCCTTC 305782 Query 68363 CTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTACTTCCAAGG 68421 ||||||||| |||| ||||||||| ||| |||||||| |||| || || || | || Sbjct 305781 CTTGTCTTGGATCTCTGCCTTGACATTCTCAATGGTGTC-ACTGAGCTCGACCTCAAGGG 305723 Query 68422 TGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||| || || || |||||||| | || |||||||| Sbjct 305722 TGATGGCCTTGCCAGTCAGGGTCTTCAAAAAGATCTGCAT 305683 >seq2455 Length=1213480 Score = 100 bits (110), Expect = 5e-16 Identities = 140/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 68267 GGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGC 68326 ||||||||| || ||| | |||||| || || ||||| || | ||| || || || Sbjct 1041306 GGACTCTTTCTGAATGCTGGGATCGGAAAGAGTGTGGCCATCCTCCAGCTGTTTGCCCGC 1041247 Query 68327 GAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386 ||||| || || ||||| |||| ||||| ||||||||||| || || || ||||| Sbjct 1041246 AAATATCAGGTGCTGCTGGTCAAGTGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC 1041187 Query 68387 GGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTT 68446 ||| ||||||| | || || || | ||||||||| || ||| | |||||||| Sbjct 1041186 ATTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATCAGGGTCTT 1041127 Query 68447 GACGAATATCTGCAT 68461 || || |||||||| Sbjct 1041126 CAC-AAAATCTGCAT 1041113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921313979063840