Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2263 113 1e-19 seq4120 107 5e-18 seq4565 104 6e-17 >seq2263 Length=894866 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||||| || ||||| || ||||| | || || ||||| ||| Sbjct 850672 TCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAG 850613 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| || || ||||||||||| || || ||||| || Sbjct 850612 ATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATCCTGGATCTTGGCCTTCACATTC 850553 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| || Sbjct 850552 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 850493 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 850492 AAGATTTGCATTTTG 850478 >seq4120 Length=149214 Score = 107 bits (118), Expect = 5e-18 Identities = 163/228 (71%), Gaps = 7/228 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGA-GTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||| |||| |||| | | ||||||| ||| || ||||| || || ||||| Sbjct 17836 CCACCACGGAAGTCTCAACGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAAA 17895 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | |||| ||| ||||| | ||| || || || || ||||| | || ||| || || Sbjct 17896 GTACGTG--TCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCT-TGCTGA---TCAGG 17949 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| ||||||||||| || || || || |||||| | | ||| | ||| || Sbjct 17950 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGAC 18009 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||| |||||||| || || || || ||||| |||||||| Sbjct 18010 CTCGAGAGCGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 18057 >seq4565 Length=307966 Score = 104 bits (114), Expect = 6e-17 Identities = 153/215 (71%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| | || ||||||| ||| | || ||||| || |||||||| | || ||| Sbjct 133378 AGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGT 133433 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCT 288372 || ||||| | ||| || || || || ||||| | |||| | |||| || |||||| Sbjct 133434 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAA---GGAATTCCT 133490 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 || ||||||||||| || | || || |||| ||| | ||| | ||| || | ||| Sbjct 133491 TCCTTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGA 133550 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATAT 288467 ||||| |||||||| || || || || ||||| || Sbjct 133551 GTGATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 133585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179249759371416