Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2263 131 2e-25 seq6389 113 5e-20 seq4565 98.7 1e-15 seq4120 89.7 5e-13 >seq2263 Length=894866 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| ||||| || |||||||| || | | ||||| | ||||| ||||||||||| Sbjct 850678 GTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCTTCCAGCTGCTTGCCT 850619 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||||| |||||||||||| || || || || || || || || || ||| Sbjct 850618 GCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATCCTGGATCTTGGCCTTC 850559 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || |||| || ||||| || | || | |||||||||||||| || Sbjct 850558 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 850499 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || || ||||||||||| Sbjct 850498 TTCACAAAGATTTGCATTTT 850479 >seq6389 Length=1055299 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || |||||||| || | | ||||||| | ||||| |||||||| || Sbjct 901645 GTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTCCCA 901704 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||| || || || || || || || ||||| || ||| ||| Sbjct 901705 GCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATCTTTGCCTTG 901764 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || || | || || || || | || | |||||||||||||| || Sbjct 901765 ACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 901824 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 901825 TTCACGAAGATCTGCAT 901841 >seq4565 Length=307966 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| || | || ||||||||||| || || | || || | Sbjct 133380 TCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGTCC 133435 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| |||| || | |||||||| | |||||||||||| || Sbjct 133436 ATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCCTT 133495 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| | | |||||| || || || | | ||| | Sbjct 133496 ATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTGAT 133555 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAAT 64437 |||||| || || | |||||||||||||| Sbjct 133556 GGTCTTCCCTGTAAGGGTTTTTACGAAAAT 133585 >seq4120 Length=149214 Score = 89.7 bits (98), Expect = 5e-13 Identities = 163/234 (70%), Gaps = 11/234 (5%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAA-TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTG 64274 ||| || || || ||| | | | ||||||| || || || |||||||||||||| || Sbjct 17835 ACCACCACGGAAGTCTCAACGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC-- 17892 Query 64275 CGACGGTGCGCG--CGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGG 64332 | || || | | ||||| || |||||||| ||| |||| || | ||||| || Sbjct 17893 --AAAGTACGTGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCT-TGCTGATC--- 17946 Query 64333 AGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTC 64392 |||||||||||| || || || || || ||||||| || |||||| || || Sbjct 17947 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTC 18006 Query 64393 CACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || | || | ||||| || || | |||||||||||||| ||||| || Sbjct 18007 GACCTCGAGAGCGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCATCTT 18060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499477593867680