Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2263 134 3e-26 seq4565 111 4e-19 seq6389 109 1e-18 seq1547 105 2e-17 seq4120 93.3 1e-13 seq142 89.7 1e-12 seq571 87.8 4e-12 >seq2263 Length=894866 Score = 134 bits (148), Expect = 3e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| ||||||||| | | ||| | |||||| Sbjct 850693 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCT 850634 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || |||||||| | ||||||||| || || || || ||| Sbjct 850633 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATCC 850574 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 850573 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 850514 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || || || |||||||| ||||| |||||| Sbjct 850513 TTGCCGGTCAGGGTCTTCACAAAGATTTG---CATTTT 850479 >seq4565 Length=307966 Score = 111 bits (122), Expect = 4e-19 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || ||||| | ||||||||| | ||| |||||| |||| | Sbjct 133376 GAAGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTCA----AAGTAC 133431 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || || || || | |||||||| | | |||||||| Sbjct 133432 GTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTT 133491 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||| ||||| ||| || || | || |||| | ||| || | | | Sbjct 133492 CCTTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAG 133551 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623 |||| ||||| || || || ||||| || ||||| Sbjct 133552 TGATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 133585 >seq6389 Length=1055299 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| | ||| || || ||||| || |||| ||||||||| | ||| || | ||||| Sbjct 901629 CAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATC 901688 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | |||||| || || || || || || Sbjct 901689 TTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTC 901748 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || |||||| ||| || |||| |||||| | | || || |||| ||||| || Sbjct 901749 TTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGT 901808 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || ||||| || || || Sbjct 901809 CTTGCCGGTCAGGGTCTTCACGAAGATCTG 901838 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || ||||| || |||| ||||||||| | || || | |||||| Sbjct 901858 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 901917 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| ||||| || | ||||||||| || || || || || Sbjct 901918 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 901977 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| || |||| |||||| | | || || || | ||||| ||| Sbjct 901978 TGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTC 902037 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || ||||| || || || Sbjct 902038 TTGCCAGTCAGGGTCTTCACGAAGATCTG 902066 >seq1547 Length=952565 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| |||||||| ||||| ||||||||||| | ||| ||||||| |||||| Sbjct 538318 CGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGTA 538259 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||||| |||||| ||||| || || || || | | ||||| || ||| |||| | Sbjct 538258 CTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTTTT 538199 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 | ||||| ||||| ||| || ||| || |||| | ||| || | | Sbjct 538198 TGCTTATCCTGGATCTTGACCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTTGAGA 538139 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || | ||||| || || || ||||| | ||||| || Sbjct 538138 ATGGTGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTG 538101 Score = 86.0 bits (94), Expect = 1e-11 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| | | || || || || ||||| ||||| ||||||| |||||| | || || ||| Sbjct 538219 AAAGATTGATTTTTGCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAACA 538278 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 | || || ||||| |||||||||||||| ||||||||||| Sbjct 538279 TTCAAAAGGAGTCCACTCTTCACCTTGTGTTGAGACTTCG 538318 >seq4120 Length=149214 Score = 93.3 bits (102), Expect = 1e-13 Identities = 154/219 (70%), Gaps = 10/219 (5%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| |||| || ||||| ||||||||||| | |||||||| |||||| | Sbjct 17844 GAAGTCTCAACGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGT----CAAAGTAC 17899 Query 199470 --TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 |||||||||||| ||||| || || || || || | ||||| || || |||||| Sbjct 17900 GTGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTC-TTGCTGATCAGG---AATTCC 17955 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| ||||| ||| || ||| || || | | ||| || || | Sbjct 17956 TTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAG 18015 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||| ||||| || || || ||||| || ||||| || Sbjct 18016 AGCGATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTG 18054 >seq142 Length=631697 Score = 89.7 bits (98), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||| ||||| | || || ||||| ||||| ||||| |||||| ||||| |||| | Sbjct 517159 GAAATCTCAACATAAAATGAAGAGTGGACTCTTTTTGAACGTTGCAGTCA----AAGTAC 517104 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || ||||| || | ||||| || ||||||||| ||| Sbjct 517103 ATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAAAAATTTCTT 517044 >seq571 Length=358238 Score = 87.8 bits (96), Expect = 4e-12 Identities = 103/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||||| || ||||| |||||||||| | |||||| ||| |||| | Sbjct 307002 GAAGTCTCAACACAAGATGAAGAGTGCACTCCTTTTGAATGTTGTAATCA----AAGTAC 307057 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGC--GAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 |||||||||||| ||||| || || || || || | ||||| || ||| |||||| Sbjct 307058 ATCCATCTTCCAGTTGCTTGCCAGCAAAAAAATTAGTCTTTGCTGATCAGGAGGAATTCC 307117 Query 199528 TTCTCGCTCCTGAATCTT 199545 ||| ||||| ||||| Sbjct 307118 TTCATTATCCTGGATCTT 307135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178517210733724