Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2263 143 3e-29 seq6389 141 1e-28 >seq2263 Length=894866 Score = 143 bits (158), Expect = 3e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || || || | ||||| |||| || ||| || ||||| ||||||||||| Sbjct 850709 GCCACCCCTCAAGCGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGA 850650 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| | || || ||||||||||| || || || | | ||||||||||| || Sbjct 850649 AAGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 850590 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | |||||| ||| |||||| ||| | || | | ||||| || | ||||| Sbjct 850589 GATCCCCTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCAC 850530 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||||||| ||||| ||||| || || |||||||||||||||||| Sbjct 850529 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTTG 850478 >seq6389 Length=1055299 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | |||||| |||| || ||| || ||||| ||||||||||| Sbjct 901843 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901902 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || |||||| | || || |||||||| ||||| || |||| | ||||||||| | || Sbjct 901903 AGGGTGCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 901962 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| ||||| || | | |||||||| | || || Sbjct 901963 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 902022 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || | |||||||| ||||| ||||| || || || ||||| |||||| Sbjct 902023 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 902070 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || || |||| |||| |||| || ||| || ||||| ||||||||||| Sbjct 901615 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901674 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | |||||| | || || |||||||| || || || |||| | |||||| || | || Sbjct 901675 AAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 901734 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| ||||| || | | |||||||| | || || Sbjct 901735 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 901794 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| ||||| || || || ||||| ||||| Sbjct 901795 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 901841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565049242969440