Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4009 143 1e-28 seq3856 129 2e-24 seq4565 109 2e-18 seq1547 105 3e-17 seq1391 100 1e-15 seq571 96.9 1e-14 seq471 93.3 2e-13 seq4010 89.7 2e-12 seq564 84.2 9e-11 >seq4009 Length=239670 Score = 143 bits (158), Expect = 1e-28 Identities = 454/698 (65%), Gaps = 13/698 (2%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || || || || || | || ||||||| || || || || || | ||| | || || Sbjct 172836 GCCATAGGCATCGACTTGGGCACCACCTACTCGTGCGTGGGGGTGTTCCAGCACGGCAAG 172895 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGT----TT 451029 || || || || || |||||||| || || || || || || | || || || Sbjct 172896 GTGGAGATCATTGCCAATGACCAGGGCAACCGCACCACCCC--CA--GCTACGTGGCCTT 172951 Query 451030 TACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCA 451088 ||| || ||||||| || | || | || || || | | | |||| ||| || Sbjct 172952 TACAGACACAGAAAGGCTCATTGGAGATGCCGCCAAGAACCA-GGTAGCCATGAATCCCC 173010 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 | ||||| || | |||||| |||||| | |||||| | | | | ||||| | ||| | Sbjct 173011 AGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGC 173070 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 || ||| | ||| | | ||| | | || | ||| || |||||| || | | | Sbjct 173071 AATCAGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGAAAACCGAAGGTGC 173130 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 || || ||||| || | |||| |||| ||||| ||||| || || ||||| | Sbjct 173131 TCGTGTCCTACAAAGGGGAGAATAAAGCTTTCTACCCTGAGGAAATCTCTTCGATGGTAC 173190 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 | ||||| ||||| || || || || | | | || | || || || |||| || | Sbjct 173191 TGACTAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGCTACCCTGTCACGAATGCTGTGA 173250 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | || || || || ||||||||||| | |||||||| || || || |||||||| | Sbjct 173251 TCACAGTGCCAGCCTATTTCAATGACTCTCAACGGCAGGCTACAAAGGATGCAGGTGTGA 173310 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 |||| || | ||||| || |||| || |||||||| ||||| ||||| | || || | Sbjct 173311 TTGCGGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCCTACG 173370 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | ||| || | || || ||| | || | | | |||||| | ||||||| Sbjct 173371 GTTTAGATAA---AGGAGGTCAAGGAGAGCGACATGTCCTGATCTTTGATCTCGGTGGAG 173427 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 | || |||| || | || | || || |||||| | ||||| |||||||| || Sbjct 173428 GTACATTTGATGTGTCCATCCTGACCATAGATGATGGGATTTTTGAGGTAAAGGCCACGG 173487 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 ||| || || || || || || || || |||| ||| Sbjct 173488 CTGGCGACACCCACCTGGGTGGGGAGGACTTTGACAAT 173525 >seq3856 Length=326664 Score = 129 bits (142), Expect = 2e-24 Identities = 833/1316 (63%), Gaps = 45/1316 (3%) Strand=Plus/Minus Query 451195 AAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAAT 451254 || |||| | | |||||| | || || || || || |||| ||| |||||| || | Sbjct 123338 AAGGCCCAAGGTCCAAGTAGAATACAAGGGAGAGACAAAAAGTTTCTATCCTGAGGAGGT 123279 Query 451255 TTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGT 451314 |||||||||||||| || || ||||| ||||| | ||| ||| |||| | || Sbjct 123278 GTCATCTATGGTTCTGACAAAGATGAAGGAAACTGGAGATGCCTATCTTGGAAAGACTGT 123219 Query 451315 TACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAA 451374 ||| ||| || | || || || ||||| || ||||| | || | || || || || Sbjct 123218 TACCATTGCTGTGGTCACAGTGCCAGCTTACTTTAATGACTCTCAGCATCAGGCTACCAA 123159 Query 451375 AGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGC 451434 ||||| ||| |||||| || | ||||||||| | ||||| |||||||| || || | Sbjct 123158 AGATGATGGAACCATTGCTAGTCTTAATGTTCTTAGGATTATAAATGAACCAACTGCTAC 123099 Query 451435 TGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATT 451494 |||| || ||| | ||| || || | || |||| |||| | | | || Sbjct 123098 TGCTACTGCTTATAGCTTAGACAA---CAAGGTTGGAGCTGAAAGAAATGTGCTGATCTT 123042 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| | || || || ||| |||| || | || | ||||| ||||| | ||||| Sbjct 123041 TGACCTAGGAGGTGGCACTTTTGATGTGTCAATCCTCACTATTGAGGATGGAATCTTTGA 122982 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 || || | || | | |||| || |||| || ||||| |||| || ||| || Sbjct 122981 GGTCAAATCTACAGCTAGAAATACACACTTAGGTGGAGAAGACTTTGACAACCAAATGGT 122922 Query 451615 GGAATGGTTGAAAACTGATGTTCAACG--AAAACTAA-AAGTAGATATTTCTACTAACCA 451671 | || | |||| |||||| | || |||| ||| || || | || Sbjct 122921 CAACCATTTTATTGCTGA-GTTCAAGGGCAAGCCTAAGAAG--GACATCAGTGAGAATAC 122865 Query 451672 AAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTT-CAA 451730 || ||| | || | || | || | ||| | | ||| ||| || || || Sbjct 122864 AAGAGCCATCCGATGCCTCCATACTGCTTGTGAACATGTTAAGTATACTCTGTCTTCCAG 122805 Query 451731 CACAAACTACTAGTATAAACATTGAT--AGTTTAGTTGATGGAATGGATT---ATGCTAC 451785 ||| || | ||||| |||||| | |||| ||| ||||| || | |||| | Sbjct 122804 CACCAA-GGCCAGTATTGTGATTGATTCACTTTA--TGAAGGAATAGACTTCCATGCCTC 122748 Query 451786 TACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTGCACGGGTA--ATG 451843 || |||| |||| |||||||| ||||| | | | || | | | || | | Sbjct 122747 CAC---TACCTGTGCCCAATTTGAA-GAATTTAATGCTG-ATCTGTTCCGTGGCACCCTA 122693 Query 451844 AAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATA-AAATTGATGAAAT 451902 | ||||| || ||| | || || | | ||| ||| ||| | | ||| |||| || Sbjct 122692 GACCCTGTAGAGGAAGCCCTTCAAGA-TGTCAAACTAGACAAGTCACAGATTCATGACAT 122634 Query 451903 TGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGA---TATGT-TGTCTTCTT 451958 ||| || || || ||| ||| | || || || |||||| | | ||| | |||||| Sbjct 122633 TGTCCTGGTTGGTAGTTTTACCTGTATCCCCAAGATTCAAAAGCTTCTGTAAGACTTCTT 122574 Query 451959 ATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTG 452018 | ||||||||||| ||||||| | || |||||||| ||| |||| |||| || Sbjct 122573 CAAT----GGAAAACAACTGAGTAAGAGTATCAACCCTGATGAGGCTTTTGCTTATGCTG 122518 Query 452019 CTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGATATTC 452075 | || || |||| || || || | | ||| | ||| || | |||| | | Sbjct 122517 CAGCTGTCCAAGTGGCCATCCTGTC---TGAAGAGAAATCTGAGAATGTTCAAGATTTGC 122461 Query 452076 TGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTA 452135 | | | ||||| || ||||| |||||||| ||||||| ||||||||| | |||||| Sbjct 122460 TACTCTTGGATGTCACTCCTCTTTCTCTTGGTATTGAAACTGCTGGTGGAGTTATGACTG 122401 Query 452136 ATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAA 452195 | ||||| | | ||| | |||||| || ||| | || || | ||| Sbjct 122400 CACTCATTAAGTGCGACACTACCATTCCTACCAAGCAGACATAGACCTTCACTACCTACT 122341 Query 452196 GTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAG 452255 ||| ||||| || ||||| ||||| || | ||||| ||| | | | ||| | Sbjct 122340 CTGACAACCAGCCTGGTGTGCTCATTCAGGTTTACGAAGGTGAATGGGTCAGGACCAAGG 122281 Query 452256 ATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTC 452315 |||| || || || | ||| || || ||| ||||| |||| | || || Sbjct 122280 ATAACAACTTGCTTGGCAAGTTTGAACTCACAGGCATACCTCC--TGCCCTGTGGTGTTC 122223 Query 452316 CTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTG 452375 |||| ||||| | || | || ||||||| ||||| ||||| ||||| ||| || | Sbjct 122222 CTCATGTTGAAGTCACTTTCAATATTGATGCCAATGGCATTCTCAATGTCTCTGCTGTGG 122163 Query 452376 A-AAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCT 452434 | | | || | |||| | | || ||||| || ||| | || || ||||| Sbjct 122162 ATGAGAGCA-CCAGAAAGGAAAATAAGATTACCATCACTGACGACAATGGGCGTTTGAGC 122104 Query 452435 AAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 || ||||| |||||| ||||| | ||||| || || | | | ||| ||||| Sbjct 122103 AAGGAAGACATTGAATGTATGGTCCAGGAAGCTGAGAAGTACTAAATTGAAGATGA 122048 >seq4565 Length=307966 Score = 109 bits (120), Expect = 2e-18 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 391055 TATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAA 391114 ||||||||| ||||| || || || || || || ||||| | |||||| | || |||| Sbjct 133586 TATTTTCGTAAAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATAC 133527 Query 391115 CATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACG 391174 || || | | || || || || |||||||||||||||||| |||| || ||| | Sbjct 133526 AATAAAAAATGTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAG 133467 Query 391175 TTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGA 391234 | ||||| | || || ||||| ||||||||| | ||||| || ||||| ||| | Sbjct 133466 ACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTATAACATTCA 133411 Query 391235 TAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||||| | || ||||| | || || ||||| Sbjct 133410 AAAGGAGACCACTCTTCATCTTGTGTTGAGACT 133378 >seq1547 Length=952565 Score = 105 bits (116), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||| | ||||| || || || || || | | ||| | |||||| | || Sbjct 538098 ATGCAGATTTTCATAAAAACCCTTACAGGGAAGACCACCATTCTCAAGGTTGAACCCTCA 538157 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| | | || || || || |||||| || ||||||||||||||| Sbjct 538158 GATACAACAGAAAATGTAAAGGTCAAGATCCAGGATAAGCAAAAAATTCCTCCTGATCAG 538217 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || ||||| | || || ||||| ||| ||||||| |||||| | || || || Sbjct 538218 CAAAGATTGATTTTTGCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAAC 538277 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || |||||| | || || ||||| Sbjct 538278 ATTCAAAAGGAGTCCACTCTTCACCTTGTGTTGAGACT 538315 >seq1391 Length=774564 Score = 100 bits (110), Expect = 1e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || || |||||||||||||| ||||| |||||||| Sbjct 618789 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAAGCAACC 618848 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| | |||||| | | || || ||||| || Sbjct 618849 AAAGATGCTGGAACTATTGCTGGACTGAATGTTATGAGGATCATCAATGAGCC 618901 >seq571 Length=358238 Score = 96.9 bits (106), Expect = 1e-14 Identities = 140/194 (72%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 391077 GGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAA 391136 || || || || ||||| | |||||||| | |||| || ||| | | || || Sbjct 307192 GGGAAGACCATCACTCTCAAGGTTGAATCCTTGGATATAATAGAAAATGTAAAGGCTAAG 307133 Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCT--CAGGGAAAC 391194 || || ||||| |||||||||||||||||||| ||| | ||||||| | | || || | Sbjct 307132 ATCCAGGATAATGAAGGAATTCCTCCTGATCAGCAAAGACTAATTTTTTTGCTGGCAAGC 307073 Query 391195 AACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGA-TGCAACACTTCAC 391253 |||| ||||||||| | ||||| ||||| || ||| | ||||| ||| || ||||| Sbjct 307072 AACTGGAAGATGGATGTACTTT----GATTACAACATTCAAAAGGAGTGC-ACTCTTCAT 307018 Query 391254 TTAGTATTAAGACT 391267 | || || ||||| Sbjct 307017 CTTGTGTTGAGACT 307004 >seq471 Length=174842 Score = 93.3 bits (102), Expect = 2e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| ||||||| |||||| | ||||||||||| Sbjct 158489 GCCACTAAGGATGCTGGCCAGATATCTGGACTAAATGTGCTTCGAGTAATTAATGAACCC 158548 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 158549 ACAGCTGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 158589 >seq4010 Length=428235 Score = 89.7 bits (98), Expect = 2e-12 Identities = 268/409 (66%), Gaps = 6/409 (1%) Strand=Plus/Minus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 |||||| | || ||||| || || |||| || || | | || |||||||||||| Sbjct 199951 CAAGTAGAATACAAAGGAGAGACAAAAAGGTTCTATCAACACAAGATGTCATCTATGGTT 199892 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || |||||||| |||| ||||| | |||| | || || |||| || Sbjct 199891 TTGACAAAAATGAAGGAAATCACAGAAACTTGTATTTGGAAGAATGTCACCAATGCTGTG 199832 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA--C 451385 | | | || ||||| || |||||| | || | || || | |||||||| ||| | Sbjct 199831 GTCATAGCACCAGCTTACTTTAATGATTCTCACCATCAGGCTAGCAAAGATGCTGGAACC 199772 Query 451386 ATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCAT 451445 || |||||||| | ||||| | | ||||| ||||| || || || ||||| | || | Sbjct 199771 AT-TTGCTGGTCTCAATGTATATAGGATTATCAATGAGCCAACTGCTTCTGCTATTGCTT 199713 Query 451446 ATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTG 451505 || |||| || || ||| | || |||| |||| | | | ||||| | || | Sbjct 199712 AT-GACTTAGACAA--AAAGGTTGGAGCTGAAAGAAATGTGCTGATCTTTGACCTAGGAG 199656 Query 451506 GAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAA 451565 | || ||| |||| || || || | ||||| |||| | ||||| || || | | Sbjct 199655 GTGGCACTTTTGATGTGTCAGTCCTCACTATTGAGGATGAAATCTTTGAGGTCAAATCCA 199596 Query 451566 CCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGT 451614 | ||| ||||| || |||| || ||||| |||| ||| ||| || Sbjct 199595 CAGCTGGAGATACCCACTTAGGTGGAGAAGACTTTGACAATCAAATGGT 199547 >seq564 Length=630068 Score = 84.2 bits (92), Expect = 9e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 524902 GCAGTTGGTATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAG 524961 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCC 451014 ||||| || || || ||||| || ||| ||||| ||||| Sbjct 524962 GTAGAGATAATTGCCAATGATCAGGGAAACCGAACCACTCC 525002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975040696483376