Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6389 136 9e-27 seq4565 114 3e-20 seq4120 105 1e-17 seq1547 102 2e-16 seq2622 84.2 5e-11 seq267 84.2 5e-11 >seq6389 Length=1055299 Score = 136 bits (150), Expect = 9e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| || ||||||||||| || || ||||| |||| || || Sbjct 901848 TCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGT 901907 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| |||||||| || || ||||| || | || ||||| || || ||||| Sbjct 901908 GCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCC 901967 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || |||||||| || ||| |||||| ||||| |||||||| || || || || Sbjct 901968 CTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAG 902027 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || |||| || || ||||| | |||||| Sbjct 902028 GGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATT 902070 Score = 123 bits (136), Expect = 6e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCT 194995 ||| || ||||||||||| || || ||||| |||| |||| || | ||||||||| |||| Sbjct 901638 GTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAG-GTGCGCCCATCTTCCAGCT 901696 Query 194996 GCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTT 195055 |||| || || ||||| || | || || || || || ||||| || |||||||| || | Sbjct 901697 GCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATCT 901756 Query 195056 TTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTG 195115 || |||||| ||||| |||||||| || || || ||||| | ||||| || | Sbjct 901757 TTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCGG 901816 Query 195116 TCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 901817 TCAGGGTCTTCACGAAGATCTGCAT 901841 >seq4565 Length=307966 Score = 114 bits (126), Expect = 3e-20 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||| ||| |||||||| || || || | ||| | Sbjct 133378 AGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGT 133433 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || || || |||| ||| ||||| | |||||| ||||| Sbjct 133434 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCC 133493 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || | || || || || ||| || | || || Sbjct 133494 TTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTG 133553 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 | ||||| ||||| | ||||||||||| Sbjct 133554 ATGGTCTTCCCTGTAAGGGTTTTTACGAA 133582 >seq4120 Length=149214 Score = 105 bits (116), Expect = 1e-17 Identities = 158/219 (72%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAG-AGTTCT 194981 |||||||| |||| |||||||||||||| |||||||| ||||| || ||| | | | Sbjct 17846 AGTCTCAACGCAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC--AAAGTACGTGT 17903 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| || ||||| || || || || |||| ||| || || |||||| ||||| Sbjct 17904 -CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTC-TTGCTGATC---AGGAATTCCTTC 17958 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || || || || ||| || || || | || ||||| ||| || || || | Sbjct 17959 CTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGC 18018 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | ||||||||||| | ||||| Sbjct 18019 GATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 18057 >seq1547 Length=952565 Score = 102 bits (112), Expect = 2e-16 Identities = 166/238 (70%), Gaps = 6/238 (3%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| |||||||||||||||||||| |||||||| || || || | | ||| || Sbjct 538315 AGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGTACTT 538256 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||| ||| || ||||| || || || || | || ||| || || |||||||| || Sbjct 538255 CCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTTTTTGC 538196 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || | || || || ||| || | || | Sbjct 538195 TTATCCTGGATCTTGACCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTTGAGAATG 538136 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGTGGTTC 195160 ||||| ||||| | ||||||| ||| | ||||| | ||| ||||||||| Sbjct 538135 GTGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTGCATCT-TGG-----TGGTGGTTC 538084 >seq2622 Length=380135 Score = 84.2 bits (92), Expect = 5e-11 Identities = 103/139 (74%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||||||| |||| ||| || ||||| |||| | || || ||||| |||||||| Sbjct 305841 CCCATCTTCCAGCTACTTCTTGGCAAAGATCAGTCTCCGCTGATCAGGAGGGATGCCTTC 305782 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGG 195099 |||||||| || | | |||||| ||||||||||||| | || | || || |||||| Sbjct 305781 CTTGTCTTGGATCTCTGCCTTGACATTCTCAATGGTGTCACTGAGC--TCGACCTCAAGG 305724 Query 195100 GTAACCGTCTTTCCTGTCA 195118 || | | ||| || |||| Sbjct 305723 GTGATGGCCTTGCCAGTCA 305705 >seq267 Length=839149 Score = 84.2 bits (92), Expect = 5e-11 Identities = 101/136 (74%), Gaps = 5/136 (4%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||||||| ||||| | |||||||||||| |||||||| ||||| || | ||| Sbjct 40058 GAGTCTCAACACAAGATAAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTATG 40113 Query 194982 CCCATCTTCGAGCTGCTTACCTGC-GAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 ||||| | || ||||| || || || || |||| ||| ||||| || ||||| |||| Sbjct 40114 TCCATCGCCCAGGTGCTTGCCAGCAAAAAATCAGTCTTTGCTGGTCAGGTGGAATTCCTT 40173 Query 195041 CTTTGTCTTGAATTTT 195056 | | ||||| || || Sbjct 40174 CCCTATCTTGGATCTT 40189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109101029782124