Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq4399 116 5e-21 >seq4399 Length=91101 Score = 116 bits (128), Expect = 5e-21 Identities = 172/240 (72%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 197401 CTAAATATCTCAAACGCGACAGATATTGAGAACGTGGCTTGGAACGGCCCTAAAATCGCT 197460 ||||| |||||| | ||||| |||||| |||| | ||||| || |||||| | || Sbjct 89980 CTAAACATCTCAGGAGACACAGAGATTGAGCACGTCACCTGGAATGGTCCTAAAGACACT 90039 Query 197461 -TTAGCATTTGCCAATCCTAAAG---ACGTTACCATAATGGATAAAAGCTACCAGGGTCG 197516 ||| || || |||| |||| || | | | || |||| ||||||||||| ||||| Sbjct 90040 CTTATTATA-GCATATCCCAAAGGAAACATAATCTTAGTGGACAAAAGCTACCATGGTCG 90098 Query 197517 TGTCAACATTAGCCAAACCAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGC 197576 | ||||| ||| | ||||| ||| ||| || ||| |||| |||| ||||| Sbjct 90099 ACTAAACATCAGCTGGAGT---TACTCCCTGTACATCAGCAACTTGACTCTGAAAGATGC 90155 Query 197577 TGGTTCGTATAAGGCCCAAATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATT 197636 || | || || ||||| || ||| |||| ||||| |||||||||| ||||||||||| Sbjct 90156 AGGAACTTACAAAGCCCAGATAAACCAAAAGAATTCTGAAGTCACCACTAAGGAGGAATT 90215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701953812518080