Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq194 111 2e-19 seq5791 107 2e-18 seq1388 91.5 2e-13 >seq194 Length=1916396 Score = 111 bits (122), Expect = 2e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 |||||||| || || | |||||| ||||| || | || ||||| | |||| ||| || Sbjct 225182 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 225123 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| ||||| | ||||||||| ||||||||||| || ||||| ||||| ||||| ||| Sbjct 225122 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 225063 Query 37320 ACAAGACGT 37328 |||| |||| Sbjct 225062 ACAACACGT 225054 Score = 91.5 bits (100), Expect = 2e-13 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||||||| | |||||||| || |||| |||| || || || || |||||||||| Sbjct 226643 CATCACTCCCATCCTCTGATATTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTT 226585 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||| ||||| |||||||| ||||||||||| Sbjct 226584 CCAGTGAAATATTCTCCATAAAGTCAAATGGATT 226551 Score = 86.0 bits (94), Expect = 7e-12 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | || ||||||||||| || | ||||||||||||||| || || ||||| || || Sbjct 223366 ATCTTTAATGTAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 223307 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT-TGAACATC 37543 || || || ||||| ||||| | |||||| | |||| ||||| || Sbjct 223306 AATTTGGAAGCCATAGAAACAGCGAGCTTCTG-TAATCTGAACTTC 223262 >seq5791 Length=909484 Score = 107 bits (118), Expect = 2e-18 Identities = 98/124 (79%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| ||||| || | ||| ||||| | |||||| || | Sbjct 169544 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTCTTCT 169603 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| | Sbjct 169604 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 169663 Query 37318 CTAC 37321 | || Sbjct 169664 CCAC 169667 >seq1388 Length=553042 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/214 (71%), Gaps = 7/214 (3%) Strand=Plus/Minus Query 37398 ATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCA 37457 || |||||||| || || |||||||| | |||||| |||| | || || || Sbjct 274620 ATCGTTTCAATGGCATTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAAT----GTGTCC 274565 Query 37458 ATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAA 37517 || || || |||||||| ||||| || || |||| || || || || || ||||| ||| Sbjct 274564 ATGAGGAA-CTATACATCTCAGAATGTATGTTTTACATGGCAATTTGGAAGCCATAGAAA 274506 Query 37518 CACCTAGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAAC 37576 || ||||| | |||| ||||| || | ||| | || || |||| ||||| || Sbjct 274505 CAGTGGGCTTCTG-TAATCTGAACGTCTTGGCTAAAACGCTCCACTCAGTTGTCATTTAC 274447 Query 37577 TATCCCATCACTAGCTGCAAAGAAAGCAAGAACA 37610 | | || | || |||||||||||||| |||||| Sbjct 274446 TCTGCCGTTGCTTGCTGCAAAGAAAGCCAGAACA 274413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592118581182880