Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6389 87.8 1e-12 >seq6389 Length=1055299 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | |||| ||||| || || ||| |||||| || || ||||| || || Sbjct 901615 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901674 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || | || |||| |||||| || ||||| ||||| | ||| ||||| | ||| Sbjct 901675 AAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 901734 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || | ||| ||| Sbjct 901735 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 901794 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| || || || || || |||| || || || || ||||||||| Sbjct 901795 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 901842 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || || | ||||| || || ||| |||||| || || ||||| || || Sbjct 901843 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901902 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| |||||| |||||||| ||||| | ||| || || | ||| Sbjct 901903 AGGGTGCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 901962 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| |||||| || ||| | | | || | ||| ||| Sbjct 901963 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 902022 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGTGT 48773 || | || || || || || |||| || || || || |||||||| || ||| Sbjct 902023 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTGTCTGT 902076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380813306251356