Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq6918 347 1e-90 seq1081 170 2e-37 seq6148 93.3 5e-14 >seq6918 Length=208629 Score = 347 bits (384), Expect = 1e-90 Identities = 666/981 (68%), Gaps = 3/981 (0%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 ||||||||| |||||||| |||| ||| || ||| ||||| ||| || ||||| || Sbjct 119809 CAGATGTTCATCCAGACACTGGATGGCAAAGTGGTCGACGTCCATGTCAAACTTATTGGC 119750 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| | | | || ||||||| || |||||||| || || | ||| || Sbjct 119749 AAACAAGTGGTGTG---TACGCAGCATCCAGTTCAAGTCTCCGGCTCCAAAAATGCACAC 119693 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 || || | ||| | ||| ||||| || ||||| |||| || || | |||||||| || Sbjct 119692 CGAGCGCACGTGGATGCCATTGCAGGGTGGGTAGGGAGCACCCTTAGAAACGTCACCCTC 119633 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||||||||||||| ||||||||||| | || ||||||||| || |||||| || | Sbjct 119632 ATAGTACTGCCACTTGACAAACCTGGCAACCGACTGCATGTCAGACAAGTCGTACTTATG 119573 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 ||| || | | || || || | || || | || | |||||||| || | || Sbjct 119572 GCTCAAGGAGAGTGAGCCCGGGACTTCAGGGATCCTTTGGATAGTGGCCCAGAGATACTC 119513 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 || |||||||| ||||||| | ||| ||||| |||| | |||| ||| || Sbjct 119512 ATCTGGGCTGTATGTGTCCTGCGCCCACTCCATAAACTTTTGGATTTTTTCATCCTCTAG 119453 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 || | || || ||| | || ||||| || || ||||| || || | ||| | Sbjct 119452 CACATACCCCACATACTCCCTGCTGACCACAAAATAGGCACTGCCTGAAAAAAGAGGTGT 119393 Query 160472 GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCGC 160531 | || || ||||| | || ||||| || | ||| || || | | | Sbjct 119392 TTCCAGTGGAGGACGCACTTTGACAGTCCCCGTGTTGACCAGCTTTCCATTAACAACCAC 119333 Query 160532 GTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGTT 160591 || |||| |||||||| | || || ||||| || || || || ||||| Sbjct 119332 ATGCTGCTTTTTCCACCTTTCTTCTTTATGGAAGGGCATCTTCTCGGTTTCAAGGCTGTT 119273 Query 160592 GGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTC 160651 |||| || || || |||| | |||| || |||||||| || || | ||||| || Sbjct 119272 TTCACCCATGAAGGACTTGAGCTTCCTGACAATTTCTAGGTTGGTTTTAATAGGAAAATC 119213 Query 160652 GGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCAT 160711 ||||||| | ||||| | ||||||||| || |||| || ||||||| ||| Sbjct 119212 CATACCGCAAAGATTTATTAAGTACTTCCAGCGTGCACTCATTCTGTAGAGGTCCCCCAT 119153 Query 160712 GCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACT 160771 ||| || | || ||||| || || ||||| || || || || || |||| | | ||| Sbjct 119152 GCAGTTGAGGTCGGCCTGAACCCGACTCCACGATGCATAAACCACACTCTCCAACTGACT 119093 Query 160772 GGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACATCTT 160831 ||||||||||||||| |||||| ||| | || ||| ||| || ||||| || Sbjct 119092 GGCCACAAAGACGTTCCTGAAACAGGACGCAATGCCCGTCACTGCAGCTAAGAAGGACTC 119033 Query 160832 ATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAG 160891 || | |||| ||||||||| | |||||| | ||||||||| ||||||||||| || Sbjct 119032 TTCTGATTTTCTGTCCACGTGAATGCAATAGAAATTCTGAGGCATATAGATGGCCCTCAG 118973 Query 160892 CAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTC 160951 || ||| || | ||| || || || ||||| | ||| ||||| || ||||| |||||||| Sbjct 118972 CAGCCTGTCCAGCATTTCAATTTTGTGATGAACCACTATAGAATATGCTATTGGAAACTC 118913 Query 160952 GGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAATCACA 161011 | || || ||| |||| | | | || || ||| ||||||| ||| | ||| Sbjct 118912 TGCTTCTTCTTTACTAAGGGGTTCCATGATATATTTGCGCCTCTTGATGAAAGACGTACA 118853 Query 161012 ATCCCGCGTCATGTTGATATA 161032 |||| |||||||| || || Sbjct 118852 GTCCCTGGTCATGTTTATGTA 118832 >seq1081 Length=451787 Score = 170 bits (188), Expect = 2e-37 Identities = 231/321 (72%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 168151 ATAGA--GTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCA 168208 ||||| || | ||| | | | || || ||||| || || || || | ||| |||| || Sbjct 35489 ATAGATGGTGAGGCAGGCTGTCCCTGAGATCTTCCCAGAACCAAAGATATTGTAGAGACA 35430 Query 168209 CATGAAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAG 168268 |||| | || ||||| ||||||| |||||||||||| || || | |||||||| |||| Sbjct 35429 CATGTAACACCCTTCATCCTCCAGGGTGGTATTCCAGAAGGTGATAGTTGAGTTCTGGAG 35370 Query 168269 GCCCAACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTT 168328 |||| || || ||||||| | || ||||| | ||| || ||||||||||| ||| Sbjct 35369 TCCCAGCTCGGTGATGTTCATCCTGTCCTTATAGGCAGGCTGGACTACAACGCCATGGAG 35310 Query 168329 CTCGCTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTAT 168388 ||| ||||||||||||| ||| || ||||| ||||| | |||||||| || || | Sbjct 35309 CTCACTGAAGGTGGCCAGGTTTTCTGGGCTTACAGCCTTCTTTTTCTGCCATGTCACAAC 35250 Query 168389 CAGAACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTC 168448 || || || | | ||||| |||||||| | ||||| || |||| |||| || Sbjct 35249 CAAGACATCCTGGGAATTTTGCAGAGAACATCTTAAGGAAGCAGGTGTGTACAGCCTCTC 35190 Query 168449 TCGCTCATCTTGAGTTACGAC 168469 || ||||| || || || || Sbjct 35189 TCTTTCATCCTGGGTCACCAC 35169 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/205 (70%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 167898 GTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTTCCTACTTGACTCTTT 167957 || ||||| |||| || || |||| ||| |||||||| || || || || |||| Sbjct 38017 GTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCC---TTCCCCACCTGTTTCTTG 37961 Query 167958 GGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTGCGATGTAAAACGGTT 168017 || ||||| || || | ||||| || ||| ||| || ||||| | | | || | Sbjct 37960 GGGTCTTTGACCTGGAGGATGCTGGTAACAGATGTGGTCCCATTTGGGTTAGAGACAATC 37901 Query 168018 TTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATTACAGGAGCGGGTCGT 168077 | || || || |||||||||||||| ||||||||| | || | || || || ||| Sbjct 37900 TCAGTACTATTTTCAATCCCTGATCCACGGACCTTCCAGGAGATAATGGGGGCCGGGCGT 37841 Query 168078 GCTGTAGCAGAGCAGGTAATATTTA 168102 || || |||||||| || ||||||| Sbjct 37840 GCAGTGGCAGAGCAAGTGATATTTA 37816 >seq6148 Length=64040 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| ||| |||| |||| || |||| |||||| | ||||| || |||| | || Sbjct 28141 AGATACTTTGCTAGCTCACTAGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCC 28200 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || || ||||| |||| || || || || | ||| | ||||| | | || Sbjct 28201 GGAATATAATTCTCATAGTTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCC 28260 Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411 | || | ||| | |||||||| |||||| || |||| |||||||||||||| | Sbjct 28261 AGAAAAGCATTGTAAAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAA 28320 Query 176412 AAATAGAACTTACA 176425 | ||| || ||||| Sbjct 28321 AGATAAAATTTACA 28334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577026033594720