Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq4565 114 2e-20 seq1547 100 5e-16 seq4509 89.7 9e-13 >seq4565 Length=307966 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||| | ||||| || || | ||| | ||| | ||| || ||| || Sbjct 133359 TTTCTTAGCACCATCATGAAGTCTCAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTT 133418 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 ||| || |||| ||| | || |||| ||| || ||||||||||| | ||| || || Sbjct 133419 ATAGTC----AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTG 133474 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || | |||||||| |||| |||||||| Sbjct 133475 GTCAGAAGGAATTCCTTCCTTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGA 133534 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATAT 172063 | ||| || | ||||| ||||| || || || | ||||| | ||| || Sbjct 133535 GGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 133585 >seq1547 Length=952565 Score = 100 bits (110), Expect = 5e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || || | || | ||| | ||| || ||| || Sbjct 538334 TTTCTTAGCACCACCACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTT 538275 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| | | | | |||| ||| || ||||||||||| ||||| || || Sbjct 538274 CTAGTCAGACAAAGTACTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTG 538215 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || ||| || ||||| || || || |||||||| | | |||||||| Sbjct 538214 ATCAGGAGGAATTTTTTGCTTATCCTGGATCTTGACCTTTACATTTTCTGTTGTATCTGA 538155 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || | ||| | |||| || || || | ||||| ||||| |||||||| || Sbjct 538154 GGGTTCAACCTTGAGAATGGTGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTGCATCTT 538095 >seq4509 Length=362010 Score = 89.7 bits (98), Expect = 9e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 171858 AATACTAAATGTAAAGT-AGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTC 171916 || || | ||| ||||| ||| |||| ||| | || | ||||| |||| | | | || Sbjct 164311 AACACAAGATGAAAAGTGAGCTCCTTTTGAA-TGTTGTGGTCTGACAAAGGACATCCATC 164369 Query 171917 ATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATC 171976 |||| ||| || ||||||||||| | ||| || || | ||| || |||||||| |||| Sbjct 164370 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATAAGGAGGAATTCCTTCCTTATG 164429 Query 171977 TTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGT 172036 | || || |||| | || |||||| || || | ||| || || | | | ||||| Sbjct 164430 CGGGATCTTGGCTTTTCCTTTTTATATAGTGTCCGAGGGTTCGACCTCAAAAATGATGGT 164489 Query 172037 TTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || | | ||||| ||||| |||||||| || Sbjct 164490 CTTCCCCATAAGGGTTTTTATGAAAATCTGCATCTT 164525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904833096237600