Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6389 132 4e-26 seq1547 109 5e-19 seq4120 95.1 1e-14 seq4565 87.8 2e-12 >seq6389 Length=1055299 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || || || || || || ||| Sbjct 901842 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAG 901783 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||||||||||||| || || || || || ||||| Sbjct 901782 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCA 901723 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| ||||| |||||||| ||| | | | | |||| || || || Sbjct 901722 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAA 901663 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || || || || || |||||||| |||| ||| | ||||| Sbjct 901662 CATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 901615 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || || ||||| || || || Sbjct 902072 ACAATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCC 902013 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | |||||| | || | || || ||||||||||||||| || || || || || || Sbjct 902012 AGCGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGAC 901953 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || | |||||||||||||||| |||||||| ||| | | | | |||| || || Sbjct 901952 CAGCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTAC 901893 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || || || || || || ||| ||||| Sbjct 901892 AACATCCAGAAAGAGTCCACCCTGCACCTGGTG 901860 >seq1547 Length=952565 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || || ||||| || || || || || | | ||| | || ||| || | Sbjct 538097 GATGCAGATTTTCATAAAAACCCTTACAGGGAAGACCACCATTCTCAAGGTTGAACCCTC 538156 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| ||||| ||||| |||||||| || || || ||| ||||| ||||| Sbjct 538157 AGATACAACAGAAAATGTAAAGGTCAAGATCCAGGATAAGCAAAAAATTCCTCCTGATCA 538216 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| ||||| || || || ||||| || || | |||| || || || Sbjct 538217 GCAAAGATTGATTTTTGCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAA 538276 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||||| || || || ||| | |||||| || | || || || Sbjct 538277 CATTCAAAAGGAGTCCACTCTTCACCTTGTGTTGAGACTTCGTGGTGG 538324 >seq4120 Length=149214 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/210 (71%), Gaps = 9/210 (4%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | ||||| || || || || ||||| | ||||| || ||| || | Sbjct 18058 GATGCAGATTTTCGTAAAAACCCTTACAGGGAAGACTATCGCTCTCGAGGTCGAACCCTC 17999 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| ||||| ||||| |||||||| || || |||||||| ||| ||||| Sbjct 17998 GGATACAACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCT---GATCA 17942 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATG-TCAGATTATA 24881 ||| | |||| ||||| || || || ||||| ||| || || | | || || | Sbjct 17941 GCAA-GACTGATTTTTGCTGGCAAGCAACTGGAAGATG---GACACGTACTTTGACTACA 17886 Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||||||||||| || || || || |||| Sbjct 17885 ACATTCAAAAGGAGTCCACTCTTCATCTTG 17856 >seq4565 Length=307966 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| || || || || || || || ||| | || ||| || | || ||| || ||| Sbjct 133576 AAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATACAATAAAAAAT 133517 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 ||||| |||||||| || || |||||||| ||| | || || ||| | |||| ||| Sbjct 133516 GTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAGACTGATTTTT 133457 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || || ||||| ||| || || | || ||||||||||||||||| | Sbjct 133456 GCTGGCAAGCAACTGGAAGATG-GACGTACTTT---GACTATAACATTCAAAAGGAGACC 133401 Query 24899 ACACTACACTTGGTGTTGCGA 24919 || || || | |||||| || Sbjct 133400 ACTCTTCATCTTGTGTTGAGA 133380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449747041768160