Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq6389 150 1e-31 seq2263 129 4e-25 seq2455 98.7 6e-16 seq101 82.4 5e-11 >seq6389 Length=1055299 Score = 150 bits (166), Expect = 1e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | |||||||| ||| | |||| ||| ||||| ||||| ||||| || Sbjct 901615 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901674 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 | | ||||| |||| ||||| ||||| || || |||||||| | ||||| || | || Sbjct 901675 AAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 901734 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||||||||| | || ||| ||||| || || || | || ||| ||||| Sbjct 901735 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGAC--ATTCTCGATGGTGTCGCTGGGCTCGA 901792 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| || ||||||||||| Sbjct 901793 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 901841 Score = 147 bits (162), Expect = 1e-30 Identities = 162/214 (76%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||| ||| ||||| ||||| ||||| || ||| ||||| |||| Sbjct 901858 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 901917 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| |||||||| | |||||||| | || | ||||||||||| Sbjct 901918 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 901977 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || ||| ||||| || || || | || ||| |||||| || | ||| |||| Sbjct 901978 TGGATCTTTGCCTTGAC--ATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGG 902035 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || |||||||| || ||||||||||| Sbjct 902036 TCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 902069 >seq2263 Length=894866 Score = 129 bits (142), Expect = 4e-25 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||||||| | ||||||||||| | ||| ||| ||||| ||||| ||||| || Sbjct 850708 CCACCCCTCAAGCGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAA 850649 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || |||| |||| ||||| ||||| || || ||||| || | |||||||| | || Sbjct 850648 AGAGTGCGACCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 850589 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | ||||||||| || | || || || || || || || | ||| ||| ||| | Sbjct 850588 ATCCCCTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 850531 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | ||| |||||||| || || |||||||| |||||||| ||||| Sbjct 850530 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCAT 850482 >seq2455 Length=1213480 Score = 98.7 bits (108), Expect = 6e-16 Identities = 140/194 (72%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||||||| | || || || || | |||| ||||| || || || || || Sbjct 1041303 CTCTTTCTGAATGCTGGGATCGGAAAGAGTGTGGCCATCCTCCAGCTGTTTGCCCGCAAA 1041244 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| | |||||||| | || | ||||||||||| | ||||| |||||| | Sbjct 1041243 TATCAGGTGCTGCTGGTCAAGTGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC--A 1041186 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || | | ||| ||| |||||| |||| ||| |||||||| ||| | |||||||| Sbjct 1041185 TTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCATCAGGGTCTTC 1041126 Query 34964 ACAAAGATCTGCAT 34977 ||||| |||||||| Sbjct 1041125 ACAAA-ATCTGCAT 1041113 >seq101 Length=337499 Score = 82.4 bits (90), Expect = 5e-11 Identities = 83/106 (78%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 34874 CCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACAT 34931 ||||||||||| | ||||| |||||| || || || | ||| ||| |||||| | Sbjct 284107 CCCTCCTTGTCTTGGATTTTGGCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCGACCT 284164 Query 34932 CAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||| |||||||| || || |||||||| |||||||||||||| Sbjct 284165 CAAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 284210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325586531731868