Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6389 125 6e-24 seq4565 93.3 3e-14 seq4120 89.7 4e-13 >seq6389 Length=1055299 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| ||||| ||||| || || ||||| ||||| || ||||| || || | Sbjct 901615 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 901674 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || |||||| | |||| || |||||||| || || Sbjct 901675 AAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 901734 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | ||| |||||| | || | ||||| | || || Sbjct 901735 ATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACC 901794 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || || || |||||||| Sbjct 901795 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 901841 >seq4565 Length=307966 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| |||| || |||||||||||||| || | || || ||| Sbjct 133383 CAACACAAGATGAAGAGTGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGTCCATC 133438 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| ||||||||| || | ||||| || || || || Sbjct 133439 TTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCCTTATC 133498 Query 29694 TTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 || || || || || ||| ||| || || || || |||| || | ||||| || | Sbjct 133499 CTG-GATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTGATGG 133557 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATAT 29780 | || || || | |||||| || || || Sbjct 133558 TCTTCCCTGTAAGGGTTTTTACGAAAAT 133585 >seq4120 Length=149214 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/209 (70%), Gaps = 10/209 (5%) Strand=Plus/Plus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAG--AATCATCGAGT 29640 |||||| ||||| || ||||||||||| || || | || || | ||| || ||| Sbjct 17860 ATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTGTCCATCTTCCAGT 17915 Query 29641 TGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAAT 29700 || ||||||||| | |||| || ||||||||| ||||| || || || || || | Sbjct 17916 TGCTTGCCAGCAAAAATCAGTC-TTGCTGATC---AGGAATTCCTTCCTTATCCTGGATC 17971 Query 29701 TTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCA 29760 || || ||| ||||| || || || |||| || || |||| ||||| || || Sbjct 17972 TTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGCGATAGTCTTCCCT 18031 Query 29761 GTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | |||||| || || |||||||| || Sbjct 18032 GTAAGGGTTTTTACGAAAATCTGCATCTT 18060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385093509234852