Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_024382.1 Length=137090 Score E Sequences producing significant alignments: (Bits) Value seq2503 87.8 2e-12 >seq2503 Length=954022 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/133 (76%), Gaps = 5/133 (4%) Strand=Plus/Minus Query 1071 CCACAGCTCTAGCTTCTGGTCTGAAAAAGAGTAGGTTTCTCTTGAGAGTTAAGGAAGGCA 1130 ||||||| |||||||| |||||| ||| |||||| | ||| || | | | ||||||| Sbjct 868758 CCACAGCCCTAGCTTCAGGTCTGGAAA-GAGTAGCTG-CTCCTGGGGGCAACAGAAGGCA 868701 Query 1131 TTTTAAAGAAAAGGCTTAGaaaaaaaaTCTGGTGGGCACTTACATATTCTTCCATAAGT- 1189 |||| |||||| | | ||||| |||||| |||||||||| || ||||||| |||| Sbjct 868700 TTTTTAAGAAATAGTGTGGAAAAGAAATCTCTAGGGCACTTACGTAGTCTTCCAAAAGTG 868641 Query 1190 --TTTGAAAATGA 1200 ||||| || || Sbjct 868640 TCTTTGACAAGGA 868628 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/111 (78%), Gaps = 6/111 (5%) Strand=Plus/Minus Query 171 CACAAGATACAAAACAGGTTATCAGAAAA-ATTCAGTATAATTTATTAAATAATTTTCAA 229 ||||| || |||||||| |||| |||||| | ||| ||||||||||||||||| || ||| Sbjct 869953 CACAAAATGCAAAACAGATTATGAGAAAACAATCAATATAATTTATTAAATAAATTACAA 869894 Query 230 GGGCTTCTTTAAGAAGCATTAACAA-TCTAACAACATTTTATAAATAACAA 279 |||| || ||| ||| ||||||| ||| | || | ||||||| ||| Sbjct 869893 AGGCTCCTCCAAGTAGCCTTAACAACTCTTA----ATATAATAAATATCAA 869847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438413235896000