Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq6389 154 3e-32 seq4120 113 9e-20 seq1547 111 3e-19 seq4565 107 4e-18 seq3055 104 5e-17 seq4509 100 6e-16 seq571 98.7 2e-15 >seq6389 Length=1055299 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| ||||| ||||| || |||||||| || || |||||||| || || || || || Sbjct 901614 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 901673 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | || ||||| || || || ||||||||||| || || || ||||| || || Sbjct 901674 CAAGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGG 901733 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| ||||| |||||||| || ||||| || || || || | || || || Sbjct 901734 GATGCCCTCCTTGTCTTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGAC 901793 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || |||||||| |||| ||||| || || |||||||| Sbjct 901794 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 901841 >seq4120 Length=149214 Score = 113 bits (124), Expect = 9e-20 Identities = 121/158 (77%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || |||||||| || |||||| | ||||| ||| ||||||||| Sbjct 17904 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTT-GCTGATCAGGA---ATTCCTTCC 17959 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||| || ||||| || ||||||||||| | ||||| ||||| || || | || Sbjct 17960 TTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGCG 18019 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| ||||| | || ||||| || |||||||| Sbjct 18020 ATAGTCTTCCCTGTAAGGGTTTTTACGAAAATCTGCAT 18057 >seq1547 Length=952565 Score = 111 bits (122), Expect = 3e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| ||||| || || || || || || || ||||| | | | || || | ||| ||||| Sbjct 538301 GTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGTACTTCCATATTCCAGTTG 538242 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || |||||||| || | |||||| ||||| ||||| ||| || |||||| || ||||| Sbjct 538241 CTTGCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTTTTTGCTTATCCTGGATCTT 538182 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 | ||||||||||| | ||||| ||||| || | | | | | ||||| ||||| Sbjct 538181 GACCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTTGAGAATGGTGGTCTTCCCTGT 538122 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | || |||| || |||||||| Sbjct 538121 AAGGGTTTTTATGAAAATCTGCAT 538098 >seq4565 Length=307966 Score = 107 bits (118), Expect = 4e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || |||||||| || |||||||| || || | ||| ||||||||| Sbjct 133434 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAGAAGGAATTCCTTCC 133493 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||| || ||||| | |||||||||| || ||||| ||||| || | | ||| Sbjct 133494 TTATCCTGGATCTTGGTCTTTACATTTTTTATTGTATCTGAGGGTTCAACCTTGAGAGTG 133553 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATAT 82804 || ||||| ||||| | || ||||| || || Sbjct 133554 ATGGTCTTCCCTGTAAGGGTTTTTACGAAAAT 133585 >seq3055 Length=625531 Score = 104 bits (114), Expect = 5e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214 |||||||||| | |||||||||| | || || || || || ||||||||||| || ||| Sbjct 257285 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACTGTGTTTTTCATCCTGAGG 257344 Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274 || || || || ||| ||| | || ||||||||||| | ||| |||||||| || Sbjct 257345 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACGTTG 257404 Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCAAG 60311 | ||| | || ||||| ||| |||| || || |||| Sbjct 257405 TGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACAAG 257441 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 60309 AAGCATTTTTCGGAGCTCAGTTGAATTCCTTAATCCATGTTATTATGTATACTTATTATG 60368 |||||||||||||||| ||| |||||||||| |||||||| |||||||| | || |||| Sbjct 259324 AAGCATTTTTCGGAGCCCAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATG 259383 Query 60369 GTATGGCGGCGTGTGGACCTATGTTTAAAAAGTATTTATGGTGGAAGCGTTATCTTACTA 60428 | | | || | ||| || | || |||||||| | |||||||| || || || || | Sbjct 259384 GGTTAACTGCATTTGGCCCATGGATTCAAAAGTATCTTTGGTGGAAACGATACCTGACCA 259443 Query 60429 TAATGCA 60435 | |||| Sbjct 259444 TGTTGCA 259450 >seq4509 Length=362010 Score = 100 bits (110), Expect = 6e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || |||||||| || |||||||| |||| ||||| ||||||||| Sbjct 164365 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATAAGGAGGAATTCCTTCC 164424 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 |||| | ||||| |||||| | |||| || || || ||||| || || ||| | Sbjct 164425 TTATGCGGGATCTTGGCTTTTCCTTTTTATATAGTGTCCGAGGGTTCGACCTCAAAAATG 164484 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || | | || |||| || |||||||| Sbjct 164485 ATGGTCTTCCCCATAAGGGTTTTTATGAAAATCTGCAT 164522 >seq571 Length=358238 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/133 (77%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGA--TTAGTCTTTGTTGATCTGGAGGTATTCCTT 82710 || ||||| ||||| || |||||||| | |||||||||| ||||| ||||| ||||||| Sbjct 307060 CCATCTTCCAGTTGCTTGCCAGCAAAAAAATTAGTCTTTGCTGATCAGGAGGAATTCCTT 307119 Query 82711 CCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAG 82770 | ||||| || ||||| || ||||||||||| || |||| | ||| || | | || Sbjct 307120 CATTATCCTGGATCTTAGCCTTTACATTTTCTATTATATCCAAGGATTCAACCTTGAGAG 307179 Query 82771 TTATCGTCTTGCC 82783 | || ||||| || Sbjct 307180 TGATGGTCTTCCC 307192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981490417315708