Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq6389 150 2e-31 seq2263 131 2e-25 seq2622 84.2 2e-11 >seq6389 Length=1055299 Score = 150 bits (166), Expect = 2e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||||||||| || ||||| ||| || ||| | || || |||||||| || Sbjct 901872 GGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTCCC 901931 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| || |||||||| |||||||| ||||||| ||| Sbjct 901932 GGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTTGCCTT 901991 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | |||||| ||||||| || |||| ||||| ||| ||||| ||||| || Sbjct 901992 GACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGT 902051 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 902052 CTTCACGAAGATCTGCAT 902069 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| || ||||| ||| || ||| | || || ||| Sbjct 901636 AAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGC 901695 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| |||||| || || |||||||| |||||||| |||| Sbjct 901696 TGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATC 901755 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||||| | ||| | |||||| ||||||| || || | ||||| ||| |||||| Sbjct 901756 TTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTGCCG 901815 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 901816 GTCAGGGTCTTCACGAAGATCTGCAT 901841 >seq2263 Length=894866 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || ||||| ||| | ||| ||| | || || |||||||||| Sbjct 850679 GGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCA-TCTTCCAGCTGCTTGC 850621 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| |||||||||||| ||||| || ||||| || |||||| || Sbjct 850620 CTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATCCTGGATCTTGGCCT 850561 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 850560 TCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 850501 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 850500 TCTTCACAAAGATTTGCAT 850482 >seq2622 Length=380135 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 133540 GCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGT 133599 |||| || |||||||||||||||||||| ||||| | ||||| | ||||| |||| Sbjct 305803 GCTGATCAGGAGGGATGCCTTCCTTGTCTTGGATCTCTGCCTTGACATTCTCAATGGTGT 305744 Query 133600 CGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCA 133659 | || |||| || || | ||||| || ||||| ||||| || || | || ||||||| Sbjct 305743 CACTGAGCTCGACCTCAAGGGTGATGGCCTTGCCAGTCAGGGTCTTCAAAAAGATCTGCA 305684 Query 133660 T 133660 | Sbjct 305683 T 305683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483259023229280