Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4565 104 6e-17 seq1547 96.9 8e-15 seq4120 93.3 1e-13 seq571 91.5 3e-13 seq6389 89.7 1e-12 seq142 86.0 1e-11 seq2263 84.2 5e-11 >seq4565 Length=307966 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||| || || |||||| | | || ||| || || ||| | || Sbjct 133576 AAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATACAATAAAAAAT 133517 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| | ||| |||||||| || || Sbjct 133516 GTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAGACTGATTTTT 133457 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | ||||| || || ||| | || || ||| | Sbjct 133456 GCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTATAACATTCAAAAGGAGACC 133401 Query 206365 ACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||| ||||| |||||||||| Sbjct 133400 ACTCTTCATCTTGTGTTGAGACTTC 133376 >seq1547 Length=952565 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||| || || | || | | | || ||| || || ||| ||| Sbjct 538113 AAAACCCTTACAGGGAAGACCACCATTCTCAAGGTTGAACCCTCAGATACAACAGAAAAT 538172 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || || |||| || || |||||| | || || Sbjct 538173 GTAAAGGTCAAGATCCAGGATAAGCAAAAAATTCCTCCTGATCAGCAAAGATTGATTTTT 538232 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||| ||||||| |||||| | || || ||| | || || ||||| Sbjct 538233 GCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAACATTCAAAAGGAGTCC 538292 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||||||||| ||||||||||| Sbjct 538293 ACTCTTCACCTTGTGTTGAGACTTCG 538318 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| |||||||||||||| ||||| || || | || ||||||| |||||| Sbjct 538318 CGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGTA 538259 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||| |||||| ||||| || || || || | | ||| ||| Sbjct 538258 CTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTGA 538214 >seq4120 Length=149214 Score = 93.3 bits (102), Expect = 1e-13 Identities = 148/209 (71%), Gaps = 14/209 (7%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||| || || ||| || | || || ||| || || ||| ||| Sbjct 18042 AAAACCCTTACAGGGAAGACTATCGCTCTCGAGGTCGAACCCTCGGATACAACAGAAAAT 17983 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA--AAGACTTATCT 206302 |||||| ||||| || || || ||||||||| || || ||| |||||| || | Sbjct 17982 GTAAAGGCCAAGATCCAGGATAAGGAAGGAATT---CCTGA---TCAGCAAGACTGATTT 17929 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGG--AAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360 | || || ||||| |||||||||| | | ||||| || |||||| | || || || Sbjct 17928 TTGCTGGCAAGCAACTGGAAGATGGACACGTACTTT----GACTACAACATTCAAAAGGA 17873 Query 206361 GTCTACTCTTCACCTTGTTTTGAGACTTC 206389 ||| |||||||| |||| |||||||||| Sbjct 17872 GTCCACTCTTCATCTTGCGTTGAGACTTC 17844 >seq571 Length=358238 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/147 (74%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| || || |||||||| || || Sbjct 307144 GTAAAGGCTAAGATCCAGGATAATGAAGGAATTCCTCCTGATCAGCAAAGACTAATTTTT 307085 Query 206305 --GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 || || ||||| ||||||||||| | ||||| ||||||||| | || || |||| Sbjct 307084 TTGCTGGCAAGCAACTGGAAGATGGATGTACTTT----GATTACAACATTCAAAAGGAGT 307029 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||| ||||| |||||||||| Sbjct 307028 GCACTCTTCATCTTGTGTTGAGACTTC 307002 >seq6389 Length=1055299 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||| ||||| || || || || || ||| || || || ||||| Sbjct 901994 GTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTGATCTTT 901935 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||||||||| | || || |||| |||||| ||||||||||||| Sbjct 901934 GCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCC 901875 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 901874 ACCCTGCACCTGGT 901861 >seq142 Length=631697 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 206270 AAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAA 206329 ||| |||||| || || |||||||| ||||| || || ||||| ||||||||||| Sbjct 517044 AAGAAATTTTTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGAT 517103 Query 206330 GGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 | ||||| || | |||||| || |||||||| |||||||| || | |||||| ||| Sbjct 517104 GTACTTT----GACTGCAACGTTCAAAAAGAGTCCACTCTTCATTTTATGTTGAGATTTC 517159 >seq2263 Length=894866 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| |||| Sbjct 850497 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAT 850556 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || || ||| || || || ||||| Sbjct 850557 GTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCCCCCGACCAGCAGAGGCTCATCTTT 850616 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||||||||| | ||| | |||| |||||| ||||||||||||| Sbjct 850617 GCAGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGACTACAACATCCAGAAAGAGTCG 850676 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 850677 ACCCTGCACCTGGT 850690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181415416261012