Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1081 228 9e-55 seq8087 167 3e-36 seq3200 154 2e-32 seq3456 118 1e-21 seq8712 91.5 2e-13 >seq1081 Length=451787 Score = 228 bits (252), Expect = 9e-55 Identities = 242/319 (76%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 ||||||||||||||||| || | | |||| |||| || || ||| | | ||| || ||| Sbjct 35169 GTGGTGACCCAGGATGAAAGAGAGAGGCTGTACACACCTGCTTCCTTAAGATGTTCTCTG 35228 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || | ||| ||||| || || |||| || |||||||||| ||| | | ||||| Sbjct 35229 CAAAATTCCCAGGATGTCTTGGTTGTGACATGGCAGAAAAAGAAGGCTGTAAGCCCAGAA 35288 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 ||| || || || || | ||| || || || |||||||| || |||||||||| | Sbjct 35289 AACCTGGCCACCTTCAGTGAGCTCCATGGCGTTGTAGTCCAGCCTGCCTATAAGGACAGG 35348 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 || ||||||||| |||| |||||||| |||||||| ||||| || |||||||||||| | Sbjct 35349 ATGAACATCACCGAGCTGGGACTCCAGAACTCAACTATCACCTTCTGGAATACCACCCTG 35408 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 ||||| || ||||| |||| || |||| || | |||||| |||||||| ||||| ||| Sbjct 35409 GAGGATGAAGGGTGTTACATGTGTCTCTACAATATCTTTGGTTCTGGGAAGATCTCAGGG 35468 Query 171372 GTGGCCTGCCTCACCCTCT 171390 |||||||||||| ||| Sbjct 35469 ACAGCCTGCCTCACCATCT 35487 Score = 170 bits (188), Expect = 2e-37 Identities = 204/277 (74%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 ||||||||||| || || || || || |||| | || |||||||| || ||||| || Sbjct 37770 GTGCAGCCCACAGTATTCCTTCACTACAAATACTCGGAAGACCACCTAAATATCACTTGC 37829 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 ||||||| ||| |||||| | || || | |||||| | || |||| |||||| Sbjct 37830 TCTGCCACTGCACGCCCGGCCCCCATTATCTCCTGGAAGGTCCGTGGATCAGGGATTGAA 37889 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 || |||| ||| || | || | | ||||| || || ||||| ||||| | ||||| Sbjct 37890 AATAGTACTGAGATTGTCTCTAACCCAAATGGGACCACATCTGTTACCAGCATCCTCCAG 37949 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 || ||||||||||||| ||| |||| |||||||| |||||||| ||| ||||||||| Sbjct 37950 GTCAAAGACCCCAAGAAACAGGTGGGGAAGGAGGTGATCTGCCAGGTGCTGCACCTGGGG 38009 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 | ||| || |||| || ||| ||| ||||| |||| Sbjct 38010 ACTGTGACCTACTTCAGACAAAGTGTGAGCAAAGGTA 38046 >seq8087 Length=159570 Score = 167 bits (184), Expect = 3e-36 Identities = 136/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || ||||| | ||| || | |||||| |||||||| | ||||||||| |||||||| Sbjct 146868 CTTTAGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAA 146927 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || |||||||||||||| ||||||| ||||||||||||||| || ||||| |||| Sbjct 146928 CGGCACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTT 146987 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| || ||| ||||| ||||||||||| Sbjct 146988 CACCACGTAGAACTGGCAGAGCGCGTGACACGGAGGCAGCGCCAT 147032 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342 |||||||| |||||||| |||||||| || ||||| |||| ||| || | |||| Sbjct 150174 GCCCCAAAATGCCTCCATTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCCCCTCTGGTG 150233 Query 147343 GAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCC 147402 ||||| ||| | | ||||| | |||| || | |||||||||||| ||||||| Sbjct 150234 GAGAATCCCAGGCCATCCAGAAAGCCTCGGGATCCATTGGCGTCCCAGATTTTCACTCCC 150293 Query 147403 TTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCC 147435 |||| || || || |||| || ||||| ||| Sbjct 150294 TTGGAAGACAGTTCTTTAGCGTTTGTGGATCCC 150326 >seq3200 Length=211073 Score = 154 bits (170), Expect = 2e-32 Identities = 133/167 (80%), Gaps = 12/167 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||||||| |||||||||||| Sbjct 75687 AGGGTTACCTGGGTTGCCAAGCCTTGTCTGAGATGATCCAGTTTTACCTGGAGGAGGTGA 75746 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| ||||| ||||| ||| ||||| ||||| || ||||| || |||| Sbjct 75747 TGCCACAGGCGGAGAACCAC------------GGCCCAGACATCAAAGAGCACGTGAACT 75794 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | ||||| |||||||| ||||| || || ||| ||||||||| ||| Sbjct 75795 CCCTGGGAGAAAAGCTGAAGACGCTGAGGCTGAAGCTGCGGCGCTGT 75841 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| || || || |||||||| |||||||||||||| || || || ||||||| Sbjct 78105 AGCTCCAAGAGAAAGGCGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 78164 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 ||||||| || ||||||| || |||| Sbjct 78165 TAGAAGCCTATATGACAATGAAGATGA 78191 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 178081 AGTCTGAAAACAATTGCACTCACTTTCCAACCAGTTTGCCTCACATGCTCCATGAGCTCC 178140 ||||||| |||| ||||| ||||| ||| |||| ||||||||||||||| ||||||| Sbjct 74417 AGTCTGAGAACAGCTGCACCCACTTCCCAGCCAGCCTGCCTCACATGCTCCGAGAGCTCC 74476 Query 178141 GGGCCGCTTTTAGCAGAGTAAAGACttttttt 178172 | || || || |||| || |||||||| ||| Sbjct 74477 GAGCTGCCTTCGGCAGGGTGAAGACTTTCTTT 74508 >seq3456 Length=539709 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| ||||| ||| | |||| | | ||||| ||||||| |||| |||||||| Sbjct 111249 GTACTCGCTGGTATTTATCATTGGCGTGGTCGGCAACATCCTGGTGGTCCTGGTCCTCAT 111308 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||||||||||||||| | |||||||| ||||| ||| ||||||||||||| || Sbjct 111309 GCAGTACAAGAGGCTCAAAAGCATGACCAGCATCTACCTCCTCAACCTGGCCCTCTCCGA 111368 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 |||||| | | ||||| || ||||| |||||| ||| Sbjct 111369 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTAACT 111406 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 9323 TGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCACTGCTGCGTCAACCCCG 9382 ||||| ||||| | |||| | ||| ||||||||| ||| ||||||||||||||||| | Sbjct 111965 TGGACCTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGCGTCAACCCGG 112024 Query 9383 TCATCTACGCGTTTGTGGGCGAAAAGTTCC 9412 | ||||| || ||||| ||||| | ||||| Sbjct 112025 TGATCTATGCCTTTGTCGGCGAGAGGTTCC 112054 >seq8712 Length=65110 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| |||||||| | |||||||| | ||||| ||||| |||| |||| ||| Sbjct 49693 TACTCGCTGGTGTTCATCTTTGGGCTTGTGGGCAACATGCTGGTCGTCCTCATCCTGATA 49634 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 || | ||| | |||| || |||||| |||||| |||| ||||||||||| | |||| Sbjct 49633 AACTGCAAAAAACTCAAGAGCATGACTGACATCTACCTGCTCAACCTGGCCATCTCTGAC 49574 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760 ||||| | | ||||| |||| || ||| Sbjct 49573 CTGCTTTTCCTGCTCACCATCCCATTCTGG 49544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583292735740800