Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2263 150 2e-31 seq6389 136 5e-27 seq4565 132 5e-26 seq571 122 1e-22 seq4120 118 1e-21 seq1547 107 2e-18 seq2455 104 3e-17 seq83 91.5 2e-13 seq6099 82.4 9e-11 seq100 82.4 9e-11 >seq2263 Length=894866 Score = 150 bits (166), Expect = 2e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 850481 AATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 850540 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| ||||||| || || ||||| |||||||| || || || ||||| Sbjct 850541 TGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCCCCCGACCA 850600 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| ||| || || | ||||| || Sbjct 850601 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGACTACAA 850660 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 |||| || || || || || || || ||| Sbjct 850661 CATCCAGAAAGAGTCGACCCTGCACCTGGTC 850691 >seq6389 Length=1055299 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | | Sbjct 902070 AATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 902011 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| | ||||| || || || ||||||||||| || || || ||||| Sbjct 902010 CGACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 901951 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 901950 GCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAA 901891 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || ||||| || || || || | ||||| | ||||| Sbjct 901890 CATCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGAGGTGG 901843 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||| | | Sbjct 901841 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAGC 901782 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||||| || || || ||||||||||| || || || || ||| Sbjct 901781 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCAG 901722 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || |||||||| ||||| || || |||| || ||| | | ||||| || Sbjct 901721 CAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 901662 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 |||| || || ||||| || || | ||| |||| Sbjct 901661 ATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCG 901627 >seq4565 Length=307966 Score = 132 bits (146), Expect = 5e-26 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 27412 ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGC 27471 || || || || || ||||| || ||||| || ||||| ||||||| | |||| Sbjct 133585 ATTTTCGTAAAAACCCTTACAGGGAAGACCATCACTCTCAAGGTTGAACCCTCAGATACA 133526 Query 27472 ATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGT 27531 || |||| | ||| | || || ||||| ||||| ||||||||| | |||||||| | Sbjct 133525 ATAAAAAATGTAAAGACCAAGATCCAGGATAAGGAAGGAATTCCTTCTGACCAGCAAAGA 133466 Query 27532 CTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAA 27591 || ||||||||||| |||||||| || |||| ||||| | |||||||| | ||| Sbjct 133465 CTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTATAACATTCAA 133410 Query 27592 AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTC 27625 ||||| ||||||||||||| || ||| | |||| Sbjct 133409 AAGGAGACCACTCTTCATCTTGTGTTGAGACTTC 133376 >seq571 Length=358238 Score = 122 bits (134), Expect = 1e-22 Identities = 149/202 (74%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 27433 GGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAA 27492 || ||||| || ||||| ||||||| || |||| || | |||| | |||||||| Sbjct 307192 GGGAAGACCATCACTCTCAAGGTTGAATCCTTGGATATAATAGAAAATGTAAAGGCTAAG 307133 Query 27493 ATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA--TTTTTGCTGGTAAGC 27550 || ||||| || || ||||||||||| || ||||| | |||| |||||||||| |||| Sbjct 307132 ATCCAGGATAATGAAGGAATTCCTCCTGATCAGCAAAGACTAATTTTTTTGCTGGCAAGC 307073 Query 27551 AACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATC 27610 |||| || |||| |||| | || || || | |||||||| | ||||||||||| Sbjct 307072 AACTGGAAGATGGATGTACTTT----GATTACAACATTCAAAAGGAGTGCACTCTTCATC 307017 Query 27611 TAGTCTTGCGTCTTCGCGGTGG 27632 | || ||| | |||| ||||| Sbjct 307016 TTGTGTTGAGACTTCATGGTGG 306995 >seq4120 Length=149214 Score = 118 bits (130), Expect = 1e-21 Identities = 167/230 (73%), Gaps = 11/230 (5%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || ||||| || |||||||| |||| ||||| || | Sbjct 18057 ATGCAGATTTTCGTAAAAACCCTTACAGGGAAGACTATCGCTCTCGAGGTCGAACCCTCG 17998 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| | | |||| | ||||| || || ||||| ||||| ||||||||| || ||| Sbjct 17997 GATACAACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCT---GATCAG 17941 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATC--GTACCCTAGCAGACTATA 27583 || | || ||||||||||| |||||||| || |||| | |||| | ||||| | Sbjct 17940 CAA-GACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACACGTACTTT----GACTACA 17886 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTT-CGCGGTGG 27632 | | |||||||| |||||||||||||| | ||| | ||| || ||||| Sbjct 17885 ACATTCAAAAGGAGTCCACTCTTCATCTTGCGTTGAGACTTCCGTGGTGG 17836 >seq1547 Length=952565 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || | || || ||||| || ||||| | | ||| ||||||| | Sbjct 538098 ATGCAGATTTTCATAAAAACCCTTACAGGGAAGACCACCATTCTCAAGGTTGAACCCTCA 538157 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| | | |||| | |||| || || ||||| ||| | ||||||||| || ||| Sbjct 538158 GATACAACAGAAAATGTAAAGGTCAAGATCCAGGATAAGCAAAAAATTCCTCCTGATCAG 538217 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||||||||| |||||||| || ||| |||| | | ||||| || Sbjct 538218 CAAAGATTGATTTTTGCTGGCAAGCAACTGGAATATGGAAGTACTTTGTCTGACTAGAAC 538277 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| ||||||||||| || || ||| | ||||| ||||| Sbjct 538278 ATTCAAAAGGAGTCCACTCTTCACCTTGTGTTGAGACTTCGTGGTGG 538324 >seq2455 Length=1213480 Score = 104 bits (114), Expect = 3e-17 Identities = 118/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| | || Sbjct 1041113 ATGCAGAT-TTTGTGAAGACCCTGATGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 1041171 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || || ||| | || || ||||| || ||||||||||| || || | |||||| Sbjct 1041172 GACACCACTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACTTGACCAG 1041231 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATG 27562 |||| || || ||||| || || || || ||||||| Sbjct 1041232 CAGCACCTGATATTTGCGGGCAAACAGCTGGAGGATG 1041268 >seq83 Length=485407 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 27438 GACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCA 27497 |||||| | |||||||||||| | |||| | || || ||| | || ||||||| || Sbjct 29555 GACTATCAGCCTTGAGGTTGAGCCCAGTGACACCACTGAGAATGTCAAAACTAAAATCCA 29614 Query 27498 GGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGA 27557 ||||||||||| ||||| || ||||||||| ||| || ||||| | || || || || Sbjct 29615 AGACAAGGAGGGCATTCCACCTGACCAGCAGTATCTGATATTTGCAGAGAAACAGCTGGA 29674 Query 27558 GGATGATC 27565 ||||| || Sbjct 29675 GGATGGTC 29682 >seq6099 Length=511780 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 || ||||| || | |||||||||||||| || || ||| | ||||| || |||| Sbjct 122918 ACTATTGTGAATTTGGCTCAGAACTTTGTGGGAAGTAACAACATTAACTTGCTTCAGCCT 122977 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| || ||||| |||||||| |||||||| ||| | ||||| || Sbjct 122978 ATTGGTCAGTTTGGAACTCGGCTTCATGGTGGCAAAGATGCTGCAAGCCCTCGTTATATT 123037 Query 32245 TTCAC 32249 ||||| Sbjct 123038 TTCAC 123042 >seq100 Length=245584 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 |||||| | || || |||||||| ||||| ||| ||||| || ||| | | |||| Sbjct 122135 ACCATTATAAATCTGGCTCAGAATTTTGTGGGTAGCAATAATCTAAACCTCTTGCAGCCT 122076 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| ||| |||| |||||||||||| |||| || | || |||||| Sbjct 122075 ATTGGTCAGTTTGGTACCAGGCTACATGGTGGCAAGGATTCTGCTAGTCCTCGATACATC 122016 Query 32245 TTCAC 32249 ||||| Sbjct 122015 TTCAC 122011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570119545624640