Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq8087 149 5e-31 seq1840 82.4 6e-11 >seq8087 Length=159570 Score = 149 bits (164), Expect = 5e-31 Identities = 132/165 (80%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000 ||| ||||||| ||| || |||||||||||||| || | ||||||||||||||| || || Sbjct 146871 TAGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGG 146930 Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 30060 || || || |||||||| ||||||| |||||| ||||| || || ||||| |||| Sbjct 146931 CACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 146990 Query 30061 CACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 |||||| ||||| || | ||||| |||||||| || ||||| || Sbjct 146991 CACGTAGAACTGGCAGAGCGCGTGACACGGAGGCAGCGCCATCAG 147035 Score = 98.7 bits (108), Expect = 8e-16 Identities = 125/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||| || |||| ||||| || ||||||||||| ||||| || || || || |||| ||| Sbjct 150158 CATATCTTTGTATTCTGCCCCAAAATGCCTCCATTGGAAGCCATAAACTGGGCCCAAGTC 150217 Query 30283 TCCCTCTTCCCTGTGCTCGA--AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCG 30340 || || |||| || | || | ||| |||| |||| ||| ||| || |||||| Sbjct 150218 CCCTTC--CCCTCTGGTGGAGAATCCCAGGCCATCCAGAAAGCCTCGGGATCCATTGGCG 150275 Query 30341 TCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 |||||||| || || ||||| ||| || ||||| | ||||||||| || Sbjct 150276 TCCCAGATTTTCACTCCCTTGGAAGACAGTTCTTTAGCGTTTGTGGATCC 150325 >seq1840 Length=865484 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || || || || || || ||||| || || ||||| | | ||||| |||||| || || Sbjct 111644 TTGAGTTCTCTACTAAGAACTACATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCAGGA 111585 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||| || || |||||||| ||||||| ||||| || ||| Sbjct 111584 ATGGAGAACCAGGTTTTCCTACCCATAATCACCAGATTCTGTTTACCT 111537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406177827519024