Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6389 116 3e-21 seq2263 105 6e-18 >seq6389 Length=1055299 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || || || || || || | Sbjct 901841 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGAGCCCAGC 901782 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| ||||| ||| || |||||||| || ||||| || || ||||| Sbjct 901781 GACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCAG 901722 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || ||||||| | ||| | ||||| |||||| Sbjct 901721 CAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 901662 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || ||||| ||| | || ||||| |||| ||| |||| || Sbjct 901661 ATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 901615 >seq2263 Length=894866 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||||||||||| | || || || || ||||| || Sbjct 850482 ATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 850541 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || || || || || || ||||| || Sbjct 850542 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGATCCCCCCCGACCAG 850601 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| || || ||||||| |||||| Sbjct 850602 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCCGACTACAAC 850661 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || || ||||||||| | || |||| | || ||| |||||||| Sbjct 850662 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGCTTGAGGGGTGGC 850709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434772854557440