Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq8087 183 3e-41 >seq8087 Length=159570 Score = 183 bits (202), Expect = 3e-41 Identities = 137/161 (85%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||||||||||||||||||| ||||| || || |||||||||||||| || | ||| Sbjct 146884 TGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGCCC 146943 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||||||||| || || || ||||||||||||||||| || ||| | |||||||| ||| Sbjct 146944 ATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 147003 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||| | ||| ||||| || |||||||||||||| ||||| Sbjct 147004 CAGAGCGCGTGACACGGAGGCAGCGCCATCAGAGGAAGATC 147044 Score = 183 bits (202), Expect = 3e-41 Identities = 137/161 (85%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| |||||||||||||| || ||||| ||| | |||||||| |||||||| | ||| Sbjct 147044 GATCTTCCTCTGATGGCGCTGCCTCCGTGTCACGCGCTCTGCCAGTTCTACGTGGTGAAC 146985 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||||| || || || |||||||||||||| | || ||||||||| Sbjct 146984 GGTGAGCTGTCCTGCCAGCTGTACCAGCGGTCGGGAGACATGGGCCTGGGCGTGCCGTTC 146925 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||||||||||||||| || Sbjct 146924 AACATCGCCAGCTACGCCCTGCTCACGTACATGATCGCACA 146884 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || ||||| ||||| || || || ||||||||||| || ||| | Sbjct 150168 TATTCTGCCCCAAAATGCCTCCATTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCCCCT 150227 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | | ||| ||| | ||||||||| |||| || || | ||||||||||| ||| Sbjct 150228 CTGGTGGAGAATCCCAGGCCATCCAGAAAGCCTCGGGATCCATTGGCGTCCCAGATTTTC 150287 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 || ||| ||| || || || || | ||| |||| Sbjct 150288 ACTCCCTTGGAAGACAGTTCTTTAGCGTTTGTGG 150321 Score = 93.3 bits (102), Expect = 4e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| ||| | || || || || ||| ||| ||||| ||||||||||| | || || | Sbjct 150321 CCACAAACGCTAAAGAACTGTCTTCCAAGGGAGTGAAAATCTGGGACGCCAATGGATCCC 150262 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412 ||| ||||||||| | ||| ||| | | | | ||| || ||||||||||| || | Sbjct 150261 GAGGCTTTCTGGATGGCCTGGGATTCTCCACCAGAGGGGAAGGGGACTTGGGCCCAGTTT 150202 Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | || ||||| ||||| || |||||||| || || Sbjct 150201 ATGGCTTCCAATGGAGGCATTTTGGGGCAGAATA 150168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448112388987840