Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq6389 150 4e-31 seq2263 140 8e-28 seq1547 127 5e-24 seq9815 104 6e-17 seq267 100 7e-16 seq4509 98.7 2e-15 seq12661 96.9 8e-15 seq5012 93.3 1e-13 seq1059 91.5 4e-13 >seq6389 Length=1055299 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| || ||||| ||||| |||| ||||| |||| ||| || | |||||| Sbjct 901629 CAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATC 901688 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| |||||||||||||| ||||| || | || || || || || || || |||||||| Sbjct 901689 TTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGGATGCCCTCCTTGTC 901748 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||||| ||| ||| ||||||||||| || || || || | ||||| || Sbjct 901749 TTGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGT 901808 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| |||| || || | ||| | ||||| Sbjct 901809 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 901841 Score = 147 bits (162), Expect = 5e-30 Identities = 167/223 (75%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| ||||| |||| ||||| |||| || || | ||||||| Sbjct 901858 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 901917 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||||||||| || ||||| || | || ||||| || || || || ||||||||| Sbjct 901918 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 901977 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| ||||||||||| || || || || | ||||| ||| Sbjct 901978 TGGATCTTTGCCTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTC 902037 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATGGTTAC 225724 ||||| |||| || || | ||| | |||||| | | ||||| Sbjct 902038 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATTGTCT-GTTAC 902079 >seq2263 Length=894866 Score = 140 bits (154), Expect = 8e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| ||||| |||| | ||| | |||||| Sbjct 850693 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCT 850634 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || |||||||| || || || ||||| || Sbjct 850633 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTATCC 850574 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 850573 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 850514 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || || | || | ||||||||| Sbjct 850513 TTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTT 850479 >seq1547 Length=952565 Score = 127 bits (140), Expect = 5e-24 Identities = 163/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| |||||||| |||||||| || ||||| | || || || | |||||| Sbjct 538319 ACGAAGTCTCAACACAAGGTGAAGAGTGGACTCCTTTTGAATGTTCTAGTCAGACAAAGT 538260 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||| ||| || ||||| ||||| || || | || ||| || || || ||||| Sbjct 538259 ACTTCCATATTCCAGTTGCTTGCCAGCAAAAATCAATCTTTGCTGATCAGGAGGAATTTT 538200 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||| || |||||||| ||| ||| ||| | || ||||||| ||| || | | Sbjct 538199 TTGCTTATCCTGGATCTTGACCTTTACATTTTCTGTTGTATCTGAGGGTTCAACCTTGAG 538140 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || | ||||| || || | ||||||||||| | ||||| || Sbjct 538139 AATGGTGGTCTTCCCTGTAAGGGTTTTTATGAAAATCTGCATCTT 538095 >seq9815 Length=41120 Score = 104 bits (114), Expect = 6e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 7573 ACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTC 7632 || || ||||| || || || || || ||| | ||||| || | || || || ||||| Sbjct 20668 ACAGCTCATGCTTTCGTCATAATCTTTTTTATAGTTATACCTATCATAATTGGGGGTTTT 20609 Query 7633 GGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAAC 7692 |||||||||| || |||||| | ||||| || |||||||| || ||||| | | ||| Sbjct 20608 GGAAATTGATCAGTCCCTTTACTAATTGGAGCCCCTGATATAGCATTTCCTCGAATAAAC 20549 Query 7693 AATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 |||||||| |||||| | |||| || ||||| Sbjct 20548 AATATAAGCTTTTGACTTTTACCACCATCCTT 20517 >seq267 Length=839149 Score = 100 bits (110), Expect = 7e-16 Identities = 156/222 (70%), Gaps = 12/222 (5%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||||| ||||| | |||||||| || ||||| | ||||| || ||||| Sbjct 40059 AGTCTCAACACAAGATAAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTATGT 40114 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGA-TAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614 ||||| | || ||||| ||||| || | | |||| ||| ||||| || ||||| ||||| Sbjct 40115 CCATCGCCCAGGTGCTTGCCAGCAAAAAATCAGTCTTTGCTGGTCAGGTGGAATTCCTTC 40174 Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 | | ||||||||||| ||| ||| ||| ||||||| ||| | | | || Sbjct 40175 CCTATCTTGGATCTTGGCCTTTACATTTTC-------TCTGAGGGTTCACCCTGAACAGT 40227 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||| ||||| || || | ||||||||||| | ||||| || Sbjct 40228 GATGGTCTTCCCTGTAACGGTTTTTATGAAAATCTGCATCTT 40269 >seq4509 Length=362010 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/224 (70%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||||| || | |||| || ||||| | |||| || | ||||| | || Sbjct 164307 TCTCAACACAAGATGAAAAGTGAGCTCCTTTTGAATGTTGTGGTCTGACAAAGGACATCC 164366 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| || ||||| ||||| || || |||| ||| || | || ||||| |||||||| Sbjct 164367 ATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATAAGGAGGAATTCCTTCCTT 164426 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 | ||||||| || | || || ||||| |||| ||| || || || |||| Sbjct 164427 ATGCGGGATCTTGGCTTTTCCTTTTTATATAGTGTCCGAGGGTTCGACCTCAAAAATGAT 164486 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT-TTTATGG 225720 ||||| ||| | | ||||||||||| | ||||| || |||| Sbjct 164487 GGTCTTCCCCATAAGGGTTTTTATGAAAATCTGCATCTTGATGG 164530 >seq12661 Length=49248 Score = 96.9 bits (106), Expect = 8e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| || | || || || | || || |||||||||||||||||||| || | || || Sbjct 23626 CAAATTGATAATGTCATCGTAACAGCTCATGCCTTTGTTATGATTTTTTTCATAGTAATA 23685 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || || ||||| | ||| ||||| ||||| ||||| || |||||| Sbjct 23686 CCCATTATAATTGGAGGCTTTGGAAACTTATTAGTTCCCTTAATAATTGGAGCCCCTGAT 23745 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 || || ||||| | | || | || || ||||| | |||| || ||||| Sbjct 23746 ATAGCATTTCCCCGAATAAATTACATGAGCTTTTGGCTCGTACCACCATCCTT 23798 >seq5012 Length=465827 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076 ||||||| ||||| || || ||| | || ||| || ||||| |||||||||||||||| Sbjct 16778 CACTTCAGTACCTGGCTCCCTACTCTGGCTGTTCCATGGGAGAGTATTTTAGAGATAATG 16719 Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122 | ||||||||||| |||||||| || || ||| ||||| |||| Sbjct 16718 GCAAACATGCTTTGATCATCTATGACGACTTATCCAAACAGGTCAA 16673 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 4477 TGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGT 4536 || |||||||| ||||| || ||||| || || || |||||||| |||||||| || ||| Sbjct 16346 TGTCCATCAGTGATAGAAATGACATTCGTTGGAATGTAAGCAGACACATCACCAGCCTGT 16405 Query 4537 GTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 ||||| | || ||||| || || | || |||||||||||| Sbjct 16406 GTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 16447 >seq1059 Length=381652 Score = 91.5 bits (100), Expect = 4e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 |||| ||||| | |||||| | || ||||| || ||||| || | || || ||| Sbjct 245946 CTCAACACAAGATAAAGAGTGAACTCCTTTTGAACTTTGTAGTCAGACAGAGAATGTCCA 246005 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 |||||||| | | ||||| ||| | ||| ||| || || || ||||| ||||||| Sbjct 246006 TCTTCTAGGTTTCTGCCAGCAAAGGTCAGTTTTTGCTGATCAGGAGGAATTTCTTCCTTA 246065 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 || |||||||| ||||| | || || || || ||| ||| || | | ||||| Sbjct 246066 TCCTGGATCTTGGCCTTCATATTGTCTATTGTATCCAAGGGTTCAACTTTAAGAGTGATG 246125 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || || || | || ||||||||| | ||||| || Sbjct 246126 GTTTTCCCTGTAAGAGCTTTTATGAAAATCTGCATCTT 246163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192122142419768