Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq8087 150 1e-31 seq1840 82.4 6e-11 >seq8087 Length=159570 Score = 150 bits (166), Expect = 1e-31 Identities = 133/166 (80%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772 ||| ||||||| ||| || |||||||||||||| || | ||||||||||||||| || || Sbjct 146871 TAGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGG 146930 Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832 ||| || || |||||||| || |||| |||||| |||||||| || ||||| |||| Sbjct 146931 CACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 146990 Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 |||||| ||||| || | || || |||||||| || ||||| ||| Sbjct 146991 CACGTAGAACTGGCAGAGCGCGTGACACGGAGGCAGCGCCATCAGA 147036 Score = 82.4 bits (90), Expect = 6e-11 Identities = 108/148 (73%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA-- 30074 ||||||||||| ||||| || || || || |||| ||| || || |||| || | || Sbjct 150180 AAATGCCTCCATTGGAAGCCATAAACTGGGCCCAAGTCCCCTTC--CCCTCTGGTGGAGA 150237 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 | ||| |||| |||| ||| ||| || |||||||||||||| || || ||||| Sbjct 150238 ATCCCAGGCCATCCAGAAAGCCTCGGGATCCATTGGCGTCCCAGATTTTCACTCCCTTGG 150297 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCC 30162 || || ||||| | ||||||||| || Sbjct 150298 AAGACAGTTCTTTAGCGTTTGTGGATCC 150325 >seq1840 Length=865484 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || || || || || || ||||| || | ||||| | | ||||| |||||| || || Sbjct 111644 TTGAGTTCTCTACTAAGAACTACATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCAGGA 111585 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || || |||||||| ||||||| ||||| |||||| Sbjct 111584 ATGGAGAACCAGGTTTTCCTACCCATAATCACCAGATTCTGTTTACCT 111537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406030675547992