Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq194 104 2e-17 seq1388 93.3 4e-14 seq5791 82.4 7e-11 >seq194 Length=1916396 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| ||||| || ||||| || | |||||||| | |||| || || Sbjct 225182 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGGCATCAGTCCTCGTTTCTTG 225123 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || ||||||||||| |||||||| || || ||||| ||| Sbjct 225122 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 225063 Query 4692 AC 4693 || Sbjct 225062 AC 225061 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| ||| ||||| || || || || |||||||||||||||||||| ||||| || ||| Sbjct 223365 TCTTTAATGTAAGTATCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 223306 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATC 4926 || || || || || || || | ||||||||| | |||||||| | | ||||| Sbjct 223305 ATTTGGAAGCCATAGAAACAGCGAGCTTCTGTAATCTGAACTTCTTGGCTAAATC 223251 >seq1388 Length=553042 Score = 93.3 bits (102), Expect = 4e-14 Identities = 125/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 4824 GTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCG 4883 ||||| || || | |||||||| ||||||||||| |||| || ||||| || || || Sbjct 274570 GTGTCCATGAGGAA-CTATACATCTCAGAATGTATGTTTTACATGGCAATTTGGAAGCCA 274512 Query 4884 TAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCG 4943 || || || |||||||| | ||||| || | | ||| | || ||| |||| || Sbjct 274511 TAGAAACAGTGGGCTTCTGTAATCTGAACGTCTTGGCTAAAACGCTCCACTCAGTTGTCA 274452 Query 4944 TTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996 |||||| | |||| || |||||||| || |||| |||| || |||| ||| Sbjct 274451 TTTACTCTGCCGTTGCTTGCTGCAAAGAAAGCCAGAACACACGACATAAGGTA 274399 >seq5791 Length=909484 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| || ||||| ||||| || || ||||||||||| ||||| || || | ||||| || Sbjct 174699 TACCAAATTTTCATTTACAATTCCATCACTGGCTGCGAAAAAGGCTAAGATGTGAGAGAT 174758 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 ||| |||| || || | ||||| || |||||||| || | ||| || | ||| || || Sbjct 174759 AAAATACTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAGTCGAC 174818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426910260655076