Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq8087 140 2e-28 >seq8087 Length=159570 Score = 140 bits (154), Expect = 2e-28 Identities = 130/165 (79%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 ||| ||||||| ||| || |||||||||||||| || | ||||||||||||||| || || Sbjct 146871 TAGACCGGTGATGTGTGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAACGG 146930 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326 || || || |||||||| ||||||| |||||| ||||| || || ||||| || | Sbjct 146931 CACGCCCAGGCCCATGTCTCCCGACCGCTGGTACAGCTGGCAGGACAGCTCACCGTTCAC 146990 Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| ||||| || | ||||| |||||||| || ||||| || Sbjct 146991 CACGTAGAACTGGCAGAGCGCGTGACACGGAGGCAGCGCCATCAG 147035 Score = 98.7 bits (108), Expect = 7e-16 Identities = 125/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||| || |||| ||||| || ||||||||||||||||| || || || || |||| ||| Sbjct 150158 CATATCTTTGTATTCTGCCCCAAAATGCCTCCATTGGAAGCCATAAACTGGGCCCAAGTC 150217 Query 27549 TCCCTCTTCCCTGTGCTCGA--AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCG 27606 || || |||| || | || | ||| |||| |||| ||| ||| || |||||| Sbjct 150218 CCCTTC--CCCTCTGGTGGAGAATCCCAGGCCATCCAGAAAGCCTCGGGATCCATTGGCG 150275 Query 27607 TCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 |||||||| || || ||||| || || ||||| | ||||||||| || Sbjct 150276 TCCCAGATTTTCACTCCCTTGGAAGACAGTTCTTTAGCGTTTGTGGATCC 150325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369386635805132