Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eulemur_20macaco_20[genbank_20GCA_5F001262655.1_202015-08-06] 26,772 sequences; 2,119,875,225 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq6389 150 4e-31 seq2263 150 4e-31 >seq6389 Length=1055299 Score = 150 bits (166), Expect = 4e-31 Identities = 167/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||||||||| || || ||| Sbjct 902066 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGA--GCCCAGCG 902009 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| || ||||| || || ||||| || ||||||| Sbjct 902008 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAGC 901949 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| ||||| || ||||| |||||||| | || || |||| || ||| Sbjct 901948 AGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACA 901889 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 901888 TCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGA 901848 Score = 134 bits (148), Expect = 3e-26 Identities = 158/208 (76%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| ||||| || || ||| Sbjct 901838 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTCGA--GCCCAGCG 901781 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| || ||||| || || ||||| || || |||| Sbjct 901780 ACACCATCGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCCCCTGATCAGC 901721 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAAC 178100 | | || ||||| || || || ||||| |||||||| | || |||| |||| || ||| Sbjct 901720 AGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCAC-CTTGTCCGACTACAAC 901662 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTG 178128 |||| ||||| || || ||||| |||| Sbjct 901661 ATCCAGAAAGAGTCCACCCTGCA-CTTG 901635 >seq2263 Length=894866 Score = 150 bits (166), Expect = 4e-31 Identities = 168/222 (76%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| |||| || ||||| || || || || || || |||||||| |||| Sbjct 850474 AGGTCAAAATGC---AAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGG 850530 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| ||||||||||||| || || ||||| ||||| || || || || Sbjct 850531 TGGA--GCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGGAT 850588 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 ||| || |||||||| | || ||||| || || || ||||| |||||||| | ||||| Sbjct 850589 CCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGTCGCACTCT 850648 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | |||| || ||| |||| ||||| || || ||||| || || Sbjct 850649 TTCCGACTACAACATCCAGAAAGAGTCGACCCTGCACCTGGT 850690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203318300637768