Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq234 95.1 3e-14
seq2718 93.3 9e-14
seq1874 86.0 1e-11
>seq234
Length=833466
Score = 95.1 bits (104), Expect = 3e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766
|||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| |
Sbjct 748419 CTTGCCCGTCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTTG 748478
Query 165767 AGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 748479 AGCCCCACGTTGGGC 748493
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 737066 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 737007
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 737006 CCCCACGTTGGGC 736994
Score = 89.7 bits (98), Expect = 1e-12
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 165690 TCGGCGGACTTAAAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATC 165749
|||| || ||| | || |||||| ||||||||||||||||||| ||||| ||||||
Sbjct 741808 TCGGAGGGTTTACAGCGGCTGCCCGACTAGCTCAGTCGGTAGAGCATGAGACTCTTAATC 741749
Query 165750 TGGTGGTCGTGGGTTCGAGCCCCACGATGGGC 165781
| |||||||||||| ||||||||| |||||
Sbjct 741748 TCAGGGTCGTGGGTTCAAGCCCCACGTTGGGC 741717
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 785140 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 785199
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 785200 CCCACGTTGGGC 785211
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 790249 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 790308
Query 165770 CCCACGATGGGC 165781
|||||| ||||
Sbjct 790309 CCCACGTCGGGC 790320
>seq2718
Length=555829
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 401214 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 401155
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 401154 GCCCCACGTTGGGC 401141
>seq1874
Length=346813
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||| | ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 39843 GCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 39784
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 39783 CCCACGTTGGGC 39772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1055390980337820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |