Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq260 154 2e-32
seq37793 96.9 4e-15
seq3013 96.9 4e-15
>seq260
Length=805401
Score = 154 bits (170), Expect = 2e-32
Identities = 547/844 (65%), Gaps = 17/844 (2%)
Strand=Plus/Plus
Query 16702 AAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAG-TAG-CT 16759
||||||||| || || ||||| || ||||||||||| || ||||| ||||||| || ||
Sbjct 242608 AAAGTTAGTCTTCCCTTCTAGTGAAATATTCTCCATAAAGTCAAAGGGATTAGCTACTCT 242667
Query 16760 GAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATAT 16819
||||| || | | |||||||| | || || || | || | || || ||
Sbjct 242668 GAAAACCTTGCTAA--AACCCAGTTCCAGCCTAAACCTTTCTTCCACGACTTAAATGTAG 242725
Query 16820 TGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAAT 16879
|| |||||| | ||||||| || || || || || | || ||| | | ||
Sbjct 242726 TGCTTCATTAAGGTGAAGTTCATCCCAATGAGCTTCACAGGCAAGGCCTCCCTAAGGAAC 242785
Query 16880 CGTTGCTCTATAACAACCGCTTCCTTAATAATA-CTAGCAACTCGTTCCTCGGACGGTGT 16938
|| ||||| | || | |||| || || || ||| | ||| || | | |
Sbjct 242786 TCCTGTTCTATCCTTGCAGCATTGGTAATTATTTCTTTCA-CTCTCTGCTCTGATGTTTT 242844
Query 16939 ATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCT 16998
||| || ||||| ||| | || || || | || || || || ||||| |||||||
Sbjct 242845 GTGTAGAAAGTGTTTGAACGTTAGGCAGGCACAGTCACAGTGCAAGCCCTCATCTCTGC- 242903
Query 16999 GATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATAT 17058
|||||||| || ||||| || | || |||| | ||||| |||||| | ||| |||||
Sbjct 242904 -ATAAGTTCATTGGAAAAAGTGAGGCCAGGCACCAGTCCTCATTTCTTGAGCCAGAATAT 242962
Query 17059 CGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC 17118
| || | || ||||||||||| || | || || | ||| | | | | | |||
Sbjct 242963 TGATGCAGAAGAACCAGAAAAGAAGATTGCTTCCACTGCAGCAGAGGTTACAATACATTC 243022
Query 17119 GGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTAT 17178
| || || || ||||||| | |||||| | | ||| || ||| | ||| |
Sbjct 243023 TACATAGGTAGCCTCTTTGTCCCCAATCCAGTGCAAGGACCAATCTGCTGCCTTCTTGAA 243082
Query 17179 GCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATA 17236
||| ||||| |||| ||||| || | | || ||| |||| || | | | ||
Sbjct 243083 ACAAGCCATCATTTCAATGGCATTGAAGAGAAATTCCCTTT---CTTTGGAATTTTAATG 243139
Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296
|| |||| || || || || ||||| || ||| |||| |||||||| || || ||
Sbjct 243140 TAAATATCAATAAGGCAACTATAGATTTCAGAATGTGTGTTTTCCATGGCAATTTGGAAG 243199
Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356
|| || || || | |||||| | || ||| || | | ||||| | | | | ||||
Sbjct 243200 CCATAGAAACAGCAGGCTTCTGTAATCTGACTTTTCTGGCTAAATCGCTTCACCAAATTT 243259
Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCC--AATATATGCTTAATGAAATATT 17414
| || || ||||| || ||| | || || || ||| || ||| | | | ||||||
Sbjct 243260 TTATTTACTATGCCATCACTCACTGCAAAGAAAGCCAGAACATAGGAT--GTAAAATATC 243317
Query 17415 TTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGG 17474
| || || ||| | | | ||||| || || ||| | | |||||| | ||||
Sbjct 243318 TCTCCTCAGGTTTCAAGCCTTCCCAGTGCTGAGTGTCCTTGTAAAGATCCACCACCTCGG 243377
Query 17475 GGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGG 17534
| |||||| ||| | || || |||||||| | ||||||||||| | || | || |
Sbjct 243378 CTGACCAAAAGGAAGCTTCGGCTTTCTTATACATTTGCCAAATATCATAGAATGGAATAG 243437
Query 17535 GGAA 17538
| ||
Sbjct 243438 GAAA 243441
>seq37793
Length=6272
Score = 96.9 bits (106), Expect = 4e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||| |||||||| |||||||| || |||||||| | || |||||| |||||||||||
Sbjct 4349 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 4408
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||| | || || || ||||||||||| || || || || | ||||| |
Sbjct 4409 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 4468
Query 17106 C 17106
|
Sbjct 4469 C 4469
>seq3013
Length=259453
Score = 96.9 bits (106), Expect = 4e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||| |||||||| |||||||| || |||||||| | || |||||| |||||||||||
Sbjct 181822 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 181881
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||| | || || || ||||||||||| || || || || | ||||| |
Sbjct 181882 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAGG 181941
Query 17106 C 17106
|
Sbjct 181942 C 181942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516384266489520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |