Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq8862 185 7e-42
>seq8862
Length=84653
Score = 185 bits (204), Expect = 7e-42
Identities = 358/524 (68%), Gaps = 6/524 (1%)
Strand=Plus/Minus
Query 18823 GACATTTTGGAGCGGAATATAAAGACTGTCAAT-CAAACTATTTACAGCAAGGAATCGAT 18881
|| |||| || || ||||| ||||| | | ||| || | | || | ||||| | ||
Sbjct 49130 GAGATTTNGGGGCAGAATACAAAGA-TATGAATTCAGATTGTTCAGGTAAAGGAGTAGAC 49072
Query 18882 CAGCTGCAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATA 18941
|||||||||| || || || || || ||||| || ||||| | || |||| || ||
Sbjct 49071 CAGCTGCAAAAAGTGATTGACACCATCAAAACCAATCCAGACGACAGAAGAATCATCATG 49012
Query 18942 TCGTCTTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGT 19001
| ||||||||||||| ||| |||| | |||| || ||||| ||||| | | ||
Sbjct 49011 TATGCTTGGAATCCAAAAGATCTCCCTCTGATGGCGCTGCCTCCGTGTCATGCCCTCTGC 48952
Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061
||| | ||| | | |||||||| | |||||||| | ||||||| || || || |||
Sbjct 48951 CAGCTCTACATAGTGAACGGTGAGCTGTCCTGCCAGCTGCACCAGAGGTCAGGAGACATG 48892
Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121
||||| || || || |||||||| | | |||||||| || || ||||| | |||||
Sbjct 48891 GGCCTGGGCGTGCCTTTCAACATCACCAGCTATGCACTGCTCACGTACATGATCGCGCA- 48833
Query 19122 GTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTG 19181
| || || || | | || || || | |||| |||| ||||||||||||||| ||
Sbjct 48832 CTCACGGGCCTGCAGCCAGGTGACTTTGTACATAATTTGGGAGATGCACATATTTACCTG 48773
Query 19182 AATCATATAGATGCTTTAAAAGTGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTT 19241
| ||| || || | ||| | ||||| ||| ||| |||||| || ||
Sbjct 48772 ACTCACATTGAGCGGCTGAAAATTCAGCTTCAGCGAGAACCAGGACCTTTCCCGAAGCTC 48713
Query 19242 AAAATTATTCGAAATGTAACAGATATAAACGACTTTAAATGGGACGATTTTCAGCTTGAT 19301
||||| ||||||| || || | | || || ||| || || ||||| ||||
Sbjct 48712 AAAATCCTTCGAAAAGT---TGAGACAGTTGATTTCAAAGCTGAAGACTTTCATATTGAA 48656
Query 19302 GGATATAATCCACAccccccccTAAAAATGGAAATGGCTCTTTA 19345
|| || |||| ||||| | ||||||||||||||| ||||
Sbjct 48655 GGGTACGATCCTCACCCAGGGATCAAAATGGAAATGGCTGTTTA 48612
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398629954412130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |