Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq633 87.8 2e-12 >seq633 Length=582679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/240 (68%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 28950 AATAGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAA 29009 ||||| || ||||||||||| ||| | || || |||| ||||| ||||| ||| ||| Sbjct 204557 AATAG-GTCAAAATGCAAATTTTCGTGAAGACTCTGACCGGCAAGACCATCACCCTGGAA 204499 Query 29010 ACGGAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTG 29069 ||| ||| || || | | || | ||| || || ||||||||||| | Sbjct 204498 GTGGAGCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATC 204439 Query 29070 CCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATG 29129 ||| || || || || || |||||||| ||||| || ||||||||| | ||| | Sbjct 204438 CCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTT 204379 Query 29130 GCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 | |||||||| || ||||| || || || | ||| ||||| | || | |||| ||| Sbjct 204378 TCTGATTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTCCGTCTCAGAGGTGGG 204319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427398874987670