Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq19690 297 2e-75
seq204 297 2e-75
seq1415 114 2e-20
seq21 105 8e-18
>seq19690
Length=14323
Score = 297 bits (328), Expect = 2e-75
Identities = 268/337 (80%), Gaps = 0/337 (0%)
Strand=Plus/Minus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
|||||||| || ||||||||||| | | | | |||||| ||||| | ||||||||||||
Sbjct 9664 AGCAGGGCTTCAATGTCGGGCTCGATGTCGATGGTCTGAAAGCGGCGACTGTACCTGCGC 9605
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|| ||| || |||| || |||| ||||||||| ||||||||||| ||||||||||||
Sbjct 9604 ACAGGCACACCATCAGGGCCAACCAGGAACTTCTCAAAGTTCCAGGCAACGTCGTTGCGG 9545
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
||||| |||||||||| |||| || ||||||| ||| |||||| | | ||||| ||
Sbjct 9544 CACACCGGAGACCAGGTGATGAACTTGGGGTCGGTCATGAGCGTAGTGCTATCGTCACTT 9485
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
||| | ||||||||||| || ||||||||||||||||| || || | || || || |||
Sbjct 9484 GGCACTGGCAGGGCCTCCCGCAGGAAGGCGAAGAGCGGGTGCGCATTCGCGCCATTCACC 9425
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
||||||||||| |||||| ||||||| |||||||| ||| || || ||||||| |||
Sbjct 9424 TCGCACTTCTCAAAGAGCGTAAAGTTGGGCTCGAACCCGCCGCCGGGTCGGACGTACTTA 9365
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393
||||| || ||||| | |||| |||||| ||||
Sbjct 9364 AGGGAGTTCAGAATCTCTTCGTTCTTGGCGTTCTCCT 9328
Score = 187 bits (206), Expect = 3e-42
Identities = 168/211 (80%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
|||| || || |||||||| |||||||| || ||||| || || ||||| | || ||||
Sbjct 9052 CCTGATGTCCAAACTGGTTGCACGGGAAGCCGAGCACGACAAGGCCCCGGGGCCCGAGGC 8993
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
||||||||||||||||||| || ||||| |||||||||||| | |||||||||||||| |
Sbjct 8992 GCCGCTGCAGCTCGTTCATTTGGGTGTAGTCCCGGACCGTGGTGCCTCAGAGGGACGCCA 8933
Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570
| ||||||||||||| ||| ||| | ||| |||| | || ||||| || || || |
Sbjct 8932 CATTCTCGATGAGCAGCACCTTGCCTTGCAAGGAGCCCAGACTTACAGGCTCCCCGCCTG 8873
Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601
| |||||| || |||||||||| ||| ||
Sbjct 8872 CCAGCGGGCGCGCCGAGAAGGCGTGCACGGA 8842
>seq204
Length=878625
Score = 297 bits (328), Expect = 2e-75
Identities = 268/337 (80%), Gaps = 0/337 (0%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116
|||||||| || ||||||||||| | | | | |||||| ||||| | ||||||||||||
Sbjct 814760 AGCAGGGCTTCAATGTCGGGCTCGATGTCGATGGTCTGAAAGCGGCGACTGTACCTGCGC 814819
Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176
|| ||| || |||| || |||| ||||||||| ||||||||||| ||||||||||||
Sbjct 814820 ACAGGCACACCATCAGGGCCAACCAGGAACTTCTCAAAGTTCCAGGCAACGTCGTTGCGG 814879
Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236
||||| |||||||||| |||| || ||||||| ||| |||||| | | ||||| ||
Sbjct 814880 CACACCGGAGACCAGGTGATGAACTTGGGGTCGGTCATGAGCGTAGTGCTATCGTCACTT 814939
Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296
||| | ||||||||||| || ||||||||||||||||| || || | || || || |||
Sbjct 814940 GGCACTGGCAGGGCCTCCCGCAGGAAGGCGAAGAGCGGGTGCGCATTCGCGCCATTCACC 814999
Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356
||||||||||| |||||| ||||||| |||||||| ||| || || ||||||| |||
Sbjct 815000 TCGCACTTCTCAAAGAGCGTAAAGTTGGGCTCGAACCCGCCGCCGGGTCGGACGTACTTA 815059
Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393
||||| || ||||| | |||| |||||| ||||
Sbjct 815060 AGGGAGTTCAGAATCTCTTCGTTCTTGGCGTTCTCCT 815096
Score = 187 bits (206), Expect = 3e-42
Identities = 168/211 (80%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
|||| || || |||||||| |||||||| || ||||| || || ||||| | || ||||
Sbjct 815372 CCTGATGTCCAAACTGGTTGCACGGGAAGCCGAGCACGACAAGGCCCCGGGGCCCGAGGC 815431
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
||||||||||||||||||| || ||||| |||||||||||| | |||||||||||||| |
Sbjct 815432 GCCGCTGCAGCTCGTTCATTTGGGTGTAGTCCCGGACCGTGGTGCCTCAGAGGGACGCCA 815491
Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570
| ||||||||||||| ||| ||| | ||| |||| | || ||||| || || || |
Sbjct 815492 CATTCTCGATGAGCAGCACCTTGCCTTGCAAGGAGCCCAGACTTACAGGCTCCCCGCCTG 815551
Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601
| |||||| || |||||||||| ||| ||
Sbjct 815552 CCAGCGGGCGCGCCGAGAAGGCGTGCACGGA 815582
>seq1415
Length=404680
Score = 114 bits (126), Expect = 2e-20
Identities = 202/287 (70%), Gaps = 7/287 (2%)
Strand=Plus/Minus
Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468
||| ||||||| || |||| | ||| || ||| ||| ||||||||| || |||
Sbjct 288900 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCCATCGGCAACTTCGCCTCCCGCCTGC 288842
Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528
| ||| || | || || |||||||| || |||||||||| || ||| | |||||||
Sbjct 288841 TGGTGCACCTCTTCCCCGAGCTCTTCACCCACGAGAACCTGCGCAAGCAGTACAACTGCA 288782
Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGCGCTTGCTCCGGCACTAT 50587
||||||| |||||||| |||| || ||||| ||| | | |||| |||||
Sbjct 288781 GCGGCTCCCTGGGCAAGAAGCAG-CTGGACCCTTCCCGCATCAAGCTCATCCGCCACTAC 288723
Query 50588 GTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGCG 50647
|| ||| |||| |||| ||| ||||| ||||| |||| ||||| |||
Sbjct 288722 GTACAGCTGCTCTACCCCCGGGCCAAAAACGACCGCGTCTGGACTCTGGAGTTCGTGGGC 288663
Query 50648 TGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693
||||||||||||||||||||||| | |||||| || ||||||
Sbjct 288662 AAGCTGGACGAGCGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 288618
>seq21
Length=1633714
Score = 105 bits (116), Expect = 8e-18
Identities = 113/148 (76%), Gaps = 5/148 (3%)
Strand=Plus/Plus
Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCG--GTGGCTGTACCTGC 83114
|||||||| | ||||| |||||| | | | | | | | | || |||||||||||| |
Sbjct 542081 AGCAGGGCTTTGATGTAGGGCTCGATGTC---GCTGTAGGAACGCAGTGGCTGTACCTAC 542137
Query 83115 GCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGC 83174
|||| || | ||| |||| |||| | ||||||||| | ||||||||| ||||||| ||
Sbjct 542138 GCACAGGTGCGCCATCAGAGCCCATGAGGAACTTCTCAATGTTCCAGGCAACGTCGTCGC 542197
Query 83175 GGCACACTGGAGACCAGGCAATGAGCTG 83202
|||||| |||||||||| |||||||
Sbjct 542198 AGCACACCCAAGACCAGGCATTGAGCTG 542225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 607430705640560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |