Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2667 95.1 2e-14 >seq2667 Length=281100 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||| | ||||| |||||||| || ||||||||| | || ||||| Sbjct 152136 GCATTTTTTGGAGCCCAGTTGAATTCCTTTATCCACGTGATTATGTACTCATACTATGGG 152195 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || | ||| || ||| | ||| |||||||| ||||||||||| || || || | Sbjct 152196 TTAACTGCATTTGG-CCCATGGATCCAG-AAGTATCTCTGGTGGAAACGATACCTAACCA 152253 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 152254 TGTTGCAGCTGGT 152266 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960 |||| ||||| | |||| ||||| | || || ||||| || || ||||| || || || Sbjct 149845 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATCCTAAGA 149904 Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020 || || || || ||| ||| || || ||||||||||| | ||| |||||||| | Sbjct 149905 AAGAAGAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACATTG 149964 Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055 | ||||| |||||||| ||| |||| || || || Sbjct 149965 TGGTGGATTGGTATTAAGTGGGTTGCAGGGGGACA 149999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921125215620560