Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq2667 95.1 2e-14
>seq2667
Length=281100
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/133 (77%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | ||||| |||||||| || ||||||||| | || |||||
Sbjct 152136 GCATTTTTTGGAGCCCAGTTGAATTCCTTTATCCACGTGATTATGTACTCATACTATGGG 152195
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || | ||| || ||| | ||| |||||||| ||||||||||| || || || |
Sbjct 152196 TTAACTGCATTTGG-CCCATGGATCCAG-AAGTATCTCTGGTGGAAACGATACCTAACCA 152253
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 152254 TGTTGCAGCTGGT 152266
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960
|||| ||||| | |||| ||||| | || || ||||| || || ||||| || || ||
Sbjct 149845 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATCCTAAGA 149904
Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020
|| || || || ||| ||| || || ||||||||||| | ||| |||||||| |
Sbjct 149905 AAGAAGAACAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACATTG 149964
Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
| ||||| |||||||| ||| |||| || || ||
Sbjct 149965 TGGTGGATTGGTATTAAGTGGGTTGCAGGGGGACA 149999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921125215620560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |