Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 113 3e-20
seq633 107 1e-18
>seq1029
Length=469353
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| || || |||||||| ||||||||||| ||||| || | ||
Sbjct 372766 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372825
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || ||||| || | || ||||||||| ||| | || |||||||||
Sbjct 372826 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372885
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | ||||| || | ||||||||
Sbjct 372886 TGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372945
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || |||||||||||||||||
Sbjct 372946 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 372977
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| || || |||||||| ||||||||||| ||||| || | ||
Sbjct 372082 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372141
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || ||||| || | || ||||||||| ||| | || |||||||||
Sbjct 372142 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372201
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | ||||| || | ||||||||
Sbjct 372202 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372261
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 372262 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 372294
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| || || |||||||| ||||||||||| ||||| || | ||
Sbjct 372310 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372369
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || ||||| || | || ||||||||| ||| | || |||||||||
Sbjct 372370 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372429
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | ||||| || | ||||||||
Sbjct 372430 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372489
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 372490 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 372522
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| || || |||||||| ||||||||||| ||||| || | ||
Sbjct 372538 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 372597
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || ||||| || | || ||||||||| ||| | || |||||||||
Sbjct 372598 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 372657
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | ||||| || | ||||||||
Sbjct 372658 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372717
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 372718 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 372750
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| || || |||||||| ||||||||||| ||||| || | ||
Sbjct 371854 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 371913
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||| || || ||||| || | || ||||||||| ||| | | |||||||||
Sbjct 371914 TCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCT 371973
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | || | || | | ||||| || | ||||||||
Sbjct 371974 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTC 372033
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 372034 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 372066
Score = 93.3 bits (102), Expect = 3e-14
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||| ||| | ||| |||||||| ||||||||||| ||||| || | ||
Sbjct 371625 CAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATC 371684
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || | || ||||||||| ||| | | |||||||||
Sbjct 371685 TTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTC 371744
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | | | || | || | | ||||| || | ||||||||
Sbjct 371745 TTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGT 371804
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||||||| || || ||||| ||||||||||||
Sbjct 371805 CTTGCCGGTCAGGGTCTTCACGAAGATCTGCATC 371838
>seq633
Length=582679
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|||||||| ||||||||||| || || ||| | || |||| |||||||||||| ||
Sbjct 204128 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 204187
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||||| ||||||||| ||| | || || || || ||||| ||| | ||
Sbjct 204188 ATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTC 204247
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | | || || |||| |||||||| |||||||| || || |||||
Sbjct 204248 TCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 204307
Query 34379 AAGATCTGCATC 34390
||||||||||||
Sbjct 204308 AAGATCTGCATC 204319
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| || || |||||||| |||||||| || || || ||| | ||
Sbjct 204335 AGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 204394
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| |||||||||||| || ||||||| ||||||||| ||| | || || || ||
Sbjct 204395 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 204454
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | || | | || || |||| ||||||||
Sbjct 204455 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 204514
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| ||||| ||||| || || |||||
Sbjct 204515 TTGCCGGTCAGAGTCTTCACGAAAATTTGCAT 204546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322365174395840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |