Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq2312 1552 0.0
seq4934 104 2e-17
>seq2312
Length=307694
Score = 1552 bits (1720), Expect = 0.0
Identities = 1316/1621 (81%), Gaps = 38/1621 (2%)
Strand=Plus/Minus
Query 107163 ATATTTGTCTATAGAAGACATCTATCTTTACCATCACTCTGGAGTTGAACTTGATGTTC- 107221
|||||||||| |||| | || ||| ||| | | | | ||||||||||||||||||||
Sbjct 206083 ATATTTGTCTGGAGAATAAATATATTTTTGCAACTAGTTTGGAGTTGAACTTGATGTTCC 206024
Query 107222 TGGA-------------TTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATC--- 107265
|||| ||||||||||| | ||||||||||||||||||||||||
Sbjct 206023 TGGAAATGTGTTCAGTGTTAGTTTGTAACTGGAGGCATTTTGTTCTGTCCAAGGATTCTG 205964
Query 107266 TCCTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTG 107325
||||||||| ||| || ||||||| || | ||| |||||||| | |||||||| |
Sbjct 205963 TCCTCCTCCTGCTTCCCAGTGCCCAGTCTGTACTGGTCTCCCATTCTGTGAAGATGATTA 205904
Query 107326 GGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGC 107385
|||||||| || || |||| | ||| | |||||||| || ||||||||||| ||||
Sbjct 205903 AGTGGAAGA-GA--CTCTGCCAGAAGCATTACCTGTGGGCTCTAGGCTGCTATATTCTGC 205847
Query 107386 TGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATC 107445
||||| ||||| ||||| ||||||| ||||| || |||||||| ||| ||||||
Sbjct 205846 TGGCCATTGTTGCTCTGCGACTTTCTCTCAGATTGAAATGTGACTCTGATCATCTGGATC 205787
Query 107446 TGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGC 107505
||||||||||||| || || || | || |||||||| || |||||||| ||||||||
Sbjct 205786 TGGAGTCCAGGGAATTTCAAAGCCTGCGCTGTAGGGGTATCTTGTACAAGTCCCTGAAGC 205727
Query 107506 TGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGG 107565
|||||||| |||| |||||| ||||| | ||||||||||| ||| ||||||||||||||
Sbjct 205726 TGCCAGCAGAGAGGTCCATCGACTGTCCAGGGATCACGCGGGGGTACCAGGAAGCAGTGA 205667
Query 107566 TCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCT 107625
|||||| || || | || ||||| || || || |||||| | | | |||| | |
Sbjct 205666 GCCAGGCTCTGCTGAATAAACTGGAGGTCAAAAAGAAGCGGGCACTTTTCACAGATGCTG 205607
Query 107626 ATTACCTCAACATAACCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGT 107685
| |||||| | || || ||| |||||||| ||| |||||| | ||||||| ||||||||
Sbjct 205606 ACTACCTCTATATGACTAGAAACTGTGAGGACTTTAAGGCCAAGAGGAAGTACATACAGT 205547
Query 107686 TCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGA 107745
| |||||||| ||||| |||||||||||||| ||||| ||||| |||||||| |||||||
Sbjct 205546 TTCCACTGAGCAAAGAGGAGCTAGACTTCCCTATTGCATACTCTATGGTGGTTCATGAGA 205487
Query 107746 AGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTG 107805
| ||||||||||||||| ||||||||||||| |||||| | |||||||||||||||||
Sbjct 205486 AAATTGAAAACTTTGAAAGGCTGCTGCGAGCTGTGTATACTCCTCAGAACATATACTGCA 205427
Query 107806 TCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCT 107865
||||| |||||| |||||||||||| |||||||||||||| |||| ||| |||| || |
Sbjct 205426 TCCACATGGATGAGAAGTCCCCAGAAACTTTCAAAGAGGCAGTCAGGGCGATTACATCTT 205367
Query 107866 GCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCA 107925
|||| || ||||||||||| ||||||||| |||| | |||| ||||||| ||||||||||
Sbjct 205366 GCTTTCCAAATGTCTTCATAGCCAGTAAGCTGGTTCGGGTGTTTTATGCTTCCTGGTCCA 205307
Query 107926 GAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGT 107985
| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 205306 GGGTGCAGGCTGACCTGAACTGCATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAAT 205247
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045
|||| ||||||||||| ||||||||||| || |||||||||||||| |||||||||| ||
Sbjct 205246 ACTTCCTGAATACATGTGGGACAGACTTTCCTATAAAGACCAATGCTGAGATGGTCCAGG 205187
Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaa 108105
|||||||||||||||| || ||||||||||||||||| ||| |||| |||||| |||||
Sbjct 205186 CCCTCAAGATGTTGAATGGGAAGAACAGTATGGAGTCAGAGATACCCACTGAGTACAAAA 205127
Query 108106 aaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGA 108165
|| ||||||||||| | ||||||| |||||||| | | || |||||||||| ||
Sbjct 205126 AAGTCCGCTGGAAATATCACTATGAGATGACAGACCAATTACACATAACCAGCAAGAAGA 205067
Query 108166 AGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTC 108225
|||| ||||||||| |||||||| | ||||| | ||||||||||||| ||||||| ||||
Sbjct 205066 AGGATCCTCCCCCTAATAATTTAACTATGTTTATAGGGAATGCCTATATTGTGGCTTCTC 205007
Query 108226 GAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCA 108285
||| ||| | |||||||||||| | |||| ||||||||| |||| |||||||||| |
Sbjct 205006 GAGACTTCATTCAACATGTCTTAAAGCACCCCAAATCCCAACAACTGATTGAATGGGTAA 204947
Query 108286 AAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGC 108345
|||||||||| ||||| || ||||||||||||||||||||||||||||| || |||||||
Sbjct 204946 AAGACACCTACAGCCCTGATGAACACCTCTGGGCCACCCTTCAGCGTGCACCATGGATGC 204887
Query 108346 CTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGC 108405
|||||||| |||| ||||| ||||||| |||||||||||||||||||||| |||||||
Sbjct 204886 CTGGCTCTCTTCCCTACCACCGCAAGTATGACATCTCAGACATGACTGCCATTGCCAGGC 204827
Query 108406 TCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCT 108465
| ||||||||| || || |||||||||||||| |||||| ||||||||||| ||||
Sbjct 204826 TGGTCAAGTGGGAGGGACATGAGGGAGATGTCAGTGAGGGGGCACCTTATGCACCTTGCT 204767
Query 108466 CTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCC 108525
|||||| ||| | | || | |||| ||||| || || ||||||||| ||||||| || |
Sbjct 204766 CTGGAACCCACCAGCGGTCTGTCTGTATTTATGGAGCTGGGGACCTGCACTGGATACTTC 204707
Query 108526 AGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGT 108585
| ||||||||||| |||| |||||||||||||| | |||||||||||| || || ||||
Sbjct 204706 AAAACCATCACCTGCTGGCCAACAAGTTTGACCCAAAGGTGGATGATAATGTTCTTCAGT 204647
Query 108586 GCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGGGACTGAACTTTGAGCTGCACTGT 108645
|||||||||||||| | ||| ||||||||||||||||||||||||| |||| ||| ||
Sbjct 204646 GCTTAGAAGAGTACTTGCGTTATAAGGCCATCTATGGGACTGAACTCTGAGACACACCGT 204587
Query 108646 G-----------------GGCCAGG-GACTGTGCCAACATGCCCAGGGCGTACTGGTACT 108687
| || |||| | ||||| |||||||||| | | |||| |||
Sbjct 204586 GAGAGAATTGCTACCTGTGGACAGGAGCATGTGCAGACATGCCCAGAACTTGCTGGGACT 204527
Query 108688 GTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGC 108747
||||||||| | ||| |||||| ||||||| |||||||||| ||| | || |||||||
Sbjct 204526 ATGTGGGGTGCGAGACTAGGGCTTTGGAATCTGTGGCATCCCCTAGGATAAGGGGGCTGC 204467
Query 108748 T 108748
|
Sbjct 204466 T 204466
>seq4934
Length=300703
Score = 104 bits (114), Expect = 2e-17
Identities = 185/270 (69%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || |||||||||||| || || || ||||| || || || ||||| ||| | ||
Sbjct 79294 CCCCTTAGTAAAGAAGAGGCGGAGTTTCCAATTGCATATTCCATAGTGGTTCATCACAAA 79353
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
||||||| |||| |||| ||| | ||| | ||| |||||||| | || || |
Sbjct 79354 ATTGAAATGCTTGACAGGCTCCTGAGGGCCATTTATATGCCTCAGAATTTCTATTGCATT 79413
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|||||||| || || || | || || ||||| | || |||| |||||
Sbjct 79414 CACGTGGACAAAAAATCAGAGGATTCCTTTTTAGCTGCGGTGATGGGCATTGCGTCCTGT 79473
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
||| || ||||| |||||||| |||||| ||| ||||||| |||||| ||
Sbjct 79474 TTCAGTAACGTCTTTGTGGCCAGTCAGTTGGAGAGTGTGATTTATGCATCCTGGGGTAGG 79533
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGAC 107957
|| || || ||||| ||||| ||| | |||
Sbjct 79534 GTCCAGGCGGACCTCAACTGCATGAAGGAC 79563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347506848159636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |