Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq8862 147 2e-30 >seq8862 Length=84653 Score = 147 bits (162), Expect = 2e-30 Identities = 351/527 (67%), Gaps = 12/527 (2%) Strand=Plus/Minus Query 20252 GACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATC 20311 || |||| || || ||||| || ||||| || ||| || || |||||||||| | Sbjct 49130 GAGATTTNGGGGCAGAATACAAAGATATGAATTCAGATTGTTCAGGTAAAGGAGTAGACC 49071 Query 20312 AATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTAT 20371 | | ||||| || ||| | || ||||| || ||| ||||||||||||| || | | Sbjct 49070 AGCTGCAAAAAGTGATTGACACCATCAAAACCAATCCAGACGACAGAAGAATCATCATGT 49011 Query 20372 GCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCC 20431 || ||||| | |||||| | ||| | ||||| ||||||| |||||| || |||| Sbjct 49010 ATGCTTGGAATCCAAAAGATCTCCCTCTGATGGCGCTGCCTCCGTGTCATGCCCTCTGCC 48951 Query 20432 AATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGG 20491 | | ||| | | || ||| |||| || || || | || | || | || |||| Sbjct 48950 AGCTCTACATAGTGAACGGTGAGCTGTCCTGCCAGCTGCACCAGAGGTCAGGAGACATGG 48891 Query 20492 GACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATG 20551 | ||||| || |||||||| || | || ||||| ||||| ||||| ||||| || || Sbjct 48890 GCCTGGGCGTGCCTTTCAACATCACCAGCTATGCACTGCTCACGTACATGATCGCGCA-C 48832 Query 20552 TTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTA 20611 | || | | | | |||||||| || || | | ||||| || ||||||||||| | Sbjct 48831 TCACGGGCCTGCAGCCAGGTGACTTTGTACATAATTTGGGAGATGCACATATTTACCTGA 48772 Query 20612 ATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTC 20671 ||| || || | | ||| | ||| | ||| ||||| || ||||| | || Sbjct 48771 CTCACATTGAGCGGCTGAAAATTCAGCTTCAGCGAGAACCAGGACCTTTCCCGAAGCTCA 48712 Query 20672 GCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAG 20731 || ||||| ||| ||| | | ||||| |||||||| || ||| | |||| Sbjct 48711 AAATCCTTCGAAAAGTT-GAGACAGT--TGATTTCAAAGCTGAAGACTTTCATATTGAAG 48655 Query 20732 GTTATAATC----CCCATAATTCAATTCCAATGGAAATGTCTGTTTA 20774 | || ||| |||| |||| |||||||||| ||||||| Sbjct 48654 GGTACGATCCTCACCCAGGGATCAA----AATGGAAATGGCTGTTTA 48612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398310654516730