Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq7635 125 6e-24
seq633 93.3 4e-14
>seq7635
Length=151111
Score = 125 bits (138), Expect = 6e-24
Identities = 117/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||| | || |||||||| ||||| || || || ||||| ||||| |||||
Sbjct 110266 ACCTCATCTTCGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCACTTGATCGTT 110325
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || |||||||||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 110326 CCCAGGTTCTTCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 110385
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 110386 CCTGTCTCTGTCTGAGACTCAATGATGGC 110414
>seq633
Length=582679
Score = 93.3 bits (102), Expect = 4e-14
Identities = 152/218 (70%), Gaps = 1/218 (0%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| |||||||||||||| ||||||||||| ||||| || |||||| | || || ||
Sbjct 204551 TCAAA-ATGCAAATTTTCGTGAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTGGAG 204493
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| |||| | || || | || ||| || |||||| | || ||
Sbjct 204492 CCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCT 204433
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || || ||||| ||| ||||||| ||| | |||
Sbjct 204432 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 204373
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| ||||| || ||||| || || | || ||||| ||
Sbjct 204372 TACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCT 204335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444766133630880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |