Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq37793 93.3 8e-14 seq3013 93.3 8e-14 >seq37793 Length=6272 Score = 93.3 bits (102), Expect = 8e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| ||||| ||||||||||||||| |||| | || ||||| || |||| Sbjct 4474 TTGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCT 4415 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || ||||||| | || | ||||||| ||||| | |||||||| Sbjct 4414 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGA 4369 >seq3013 Length=259453 Score = 93.3 bits (102), Expect = 8e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| ||||| ||||||||||||||| |||| | || ||||| || |||| Sbjct 181947 TTGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCT 181888 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || ||||||| | || | ||||||| ||||| | |||||||| Sbjct 181887 GGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGA 181842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987307933915870