Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq5167 95.1 1e-14 >seq5167 Length=254018 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| ||||| ||||||||| ||||||| | ||||||||| ||||| || ||||| || Sbjct 220560 TCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 220619 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || || |||| | ||| | || ||| |||||| || |||| ||| | Sbjct 220620 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAACCTCAAGAGTGATG 220679 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || | || ||||||||||| || ||||| Sbjct 220680 GTCTTCCCCATAAAGGTTTTTACGAAAATCTGCAT 220714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505876697712480