Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq633 87.8 1e-12 >seq633 Length=582679 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| |||||| || ||||| || || || |||||||| | | || | | || || Sbjct 204337 CACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTC 204396 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| || || ||| | || || |||||||| || ||| | ||| ||||| || Sbjct 204397 CAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTG 204456 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 || || || || | ||| || || | |||||| ||| | ||| ||||| || Sbjct 204457 GATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTT 204516 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 || || | ||| || || |||||||||||||| Sbjct 204517 GCCGGTCAGAGTCTTCACGAAAATTTGCATTTT 204549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413665786486516