Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq7340 87.8 9e-13
seq2443 86.0 3e-12
seq2718 84.2 1e-11
seq8473 82.4 4e-11
>seq7340
Length=110870
Score = 87.8 bits (96), Expect = 9e-13
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||| || | || |||||| | |||||||||| ||||||| ||||||||||||| ||
Sbjct 103907 AAAGAAGCGAAATGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCAC 103848
Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530
||||| |||||||||||||| |||||
Sbjct 103847 GCTCTAACCAACTGAGCTAACCGGCCG 103821
>seq2443
Length=296648
Score = 86.0 bits (94), Expect = 3e-12
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 103520 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 103461
Query 11528 CCGTC-GACGATT 11539
||| | |||| ||
Sbjct 103460 CCGGCTGACGTTT 103448
Score = 84.2 bits (92), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 132338 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 132397
Query 11528 CCG 11530
|||
Sbjct 132398 CCG 132400
>seq2718
Length=555829
Score = 84.2 bits (92), Expect = 1e-11
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 403549 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 403608
Query 11528 CCG 11530
|||
Sbjct 403609 CCG 403611
>seq8473
Length=90948
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 62939 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 62998
Query 11528 CC 11529
||
Sbjct 62999 CC 63000
Lambda K H
0.639 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 260919102525064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |