Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7635 96.9 9e-15
seq37793 87.8 5e-12
seq3013 87.8 5e-12
>seq7635
Length=151111
Score = 96.9 bits (106), Expect = 9e-15
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| |||||||| || || || |||
Sbjct 110432 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 110373
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || || || ||| ||||||| || |||| || || || ||
Sbjct 110372 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGAAGAACCTGGGAACGATCAAGTGC 110313
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263
|||||||| || || || || | || || |||
Sbjct 110312 AGCAACCTGTGCACAGAAATAGTAGAGTATACC 110280
>seq37793
Length=6272
Score = 87.8 bits (96), Expect = 5e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
|||||| || | || ||||| | || ||||| || ||||||||||| | ||| ||
Sbjct 4481 GAACGTGTTGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCA 4422
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
|| || ||||| || ||||| | | | ||||| || || || ||||| ||||| | |||
Sbjct 4421 ATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATT 4362
Query 22609 AGCCGAGATGAGG 22621
||| |||||||||
Sbjct 4361 AGCAGAGATGAGG 4349
>seq3013
Length=259453
Score = 87.8 bits (96), Expect = 5e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548
|||||| || | || ||||| | || ||||| || ||||||||||| | ||| ||
Sbjct 181954 GAACGTGTTGTAGCCTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCA 181895
Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608
|| || ||||| || ||||| | | | ||||| || || || ||||| ||||| | |||
Sbjct 181894 ATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATT 181835
Query 22609 AGCCGAGATGAGG 22621
||| |||||||||
Sbjct 181834 AGCAGAGATGAGG 181822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1300355856579948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |