Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq633 93.3 3e-14
seq1029 87.8 1e-12
>seq633
Length=582679
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/199 (71%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 16739 GTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCC 16798
|||||||| || || ||||||||||| | | || | | || |||| || |||||
Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181
Query 16799 GCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCT 16856
||| | || |||| ||| ||||| || | ||| ||||| || || || || ||
Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGC--CT 204239
Query 16857 TCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCG 16916
|||| | | | ||||| | ||||||| ||||| ||||||||| || |||||||| |
Sbjct 204240 TCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGG 204299
Query 16917 TTTTGACAAAAATCTGCAT 16935
| || || || ||||||||
Sbjct 204300 TCTTCACGAAGATCTGCAT 204318
>seq1029
Length=469353
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| |||| || | || |||| |||| |||||||| || || ||||||||||| |
Sbjct 372750 CCCACCTCTGAGACGGAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGA 372809
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| ||| | || |||| ||||| || || | || | || ||| ||||| ||
Sbjct 372810 CAGGGTGCGACCATCTTCCAGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGG 372869
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| |||||| ||||| || || || ||| || | | | ||||| | ||||||
Sbjct 372870 GATGCCCTCCTTGTCTTGGATCTTGGC--CTTGACGTTCTCGATGGTGTCACTGGGCTCG 372927
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | ||||||||| || |||||||| || || ||||| |||||||||
Sbjct 372928 ACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATT 372978
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/219 (69%), Gaps = 12/219 (5%)
Strand=Plus/Plus
Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782
||| |||| ||||| |||||||| || || ||||||||||| | || ||| |||||
Sbjct 371625 CAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGT----GCGTC 371680
Query 16783 C----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTT 16838
| |||| ||||| || ||| | || | || ||| ||||| || | ||||| |
Sbjct 371681 CATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCT 371740
Query 16839 TGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGT 16896
|||| || || || ||| || | | | ||||| | |||||| || | |||
Sbjct 371741 TGTCTTGGATCTTGGC--CTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGT 371798
Query 16897 GATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||||| || |||||||| || || || || ||||||||
Sbjct 371799 GATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 371837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404201737586860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |