Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq9005 102 7e-17
seq633 102 7e-17
seq1029 98.7 8e-16
seq1701 91.5 1e-13
>seq9005
Length=82358
Score = 102 bits (112), Expect = 7e-17
Identities = 145/203 (71%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273
|| ||||||| || ||||| | || || || || || || |||| ||||| || ||
Sbjct 12553 TAGAGATGCAGATCTTTGTGGAGACCTTGACGGGCAAGACCATCAC-CTTGAGGTCGAGC 12495
Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333
||| || ||| | | || |||| ||| | |||||||||||||| || ||| | |
Sbjct 12494 CCAGTGACACCATCAAGAATGTCAACGCCAAAGTCCAAGACAAGGAGGGCATCCCAGCTG 12435
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
| || || | ||| |||||||| ||||||||| | |||||| || ||| | || || |
Sbjct 12434 ACCAGCAGCATCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCACACTCTTTCAGACT 12375
Query 22394 ACAACATTCAAAAAGAATCCACC 22416
||||| | || |||| ||||||
Sbjct 12374 ACAACGTCCAGGAAGAGTCCACC 12352
>seq633
Length=582679
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || ||||||||||| || || ||| | ||||| || || |||| || ||||||||
Sbjct 204552 GTCAAAATGCAAATTTTCGTGAAGACTCTGACCGGCAAGACCATCACCCTGGAAGTGGAG 204493
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
||| || ||| | || || | || || || || || || || || || || ||
Sbjct 204492 CCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCT 204433
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || | || || ||||| ||||| ||| | || ||| |||||| | || |||
Sbjct 204432 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAT 204373
Query 22393 TACAACATTCAAAAAGAATCCACC 22416
|||||||| || ||||| ||||||
Sbjct 204372 TACAACATCCAGAAAGAGTCCACC 204349
>seq1029
Length=469353
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | ||||| || || |||| || || || || |||
Sbjct 371838 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 371779
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || | |||| || || |||||||||||||| || || || || ||
Sbjct 371778 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCTGACCA 371719
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || ||||| || |||||| | || ||| |||||| | || || |||||
Sbjct 371718 GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 371659
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||| ||||| ||||| | || || || |||| ||| | || |||
Sbjct 371658 CATTCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGTGGT 371610
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || |||| || || || || |||
Sbjct 372977 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 372918
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || | |||| || || |||||||||||||| || || || || ||
Sbjct 372917 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 372858
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || || || |||||| | || ||| |||||| | || || ||||||
Sbjct 372857 CAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAAC 372798
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || ||||| ||||||
Sbjct 372797 ATCCAGAAAGAGTCCACC 372780
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | ||||| || || |||| || || || || |||
Sbjct 372066 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372007
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || | |||| || || |||||||||||||| || || || || ||
Sbjct 372006 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCCCCTGACCA 371947
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || || || || |||||| | || ||| |||||| | || || |||||
Sbjct 371946 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 371887
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| ||||||
Sbjct 371886 CATCCAGAAAGAGTCCACC 371868
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | ||||| || || |||| || || || || |||
Sbjct 372294 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372235
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || | |||| || || |||||||||||||| || || || || ||
Sbjct 372234 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372175
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || || || || |||||| | || ||| |||||| | || || |||||
Sbjct 372174 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372115
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| ||||||
Sbjct 372114 CATCCAGAAAGAGTCCACC 372096
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | ||||| || || |||| || || || || |||
Sbjct 372522 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372463
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || | |||| || || |||||||||||||| || || || || ||
Sbjct 372462 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372403
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || || || || |||||| | || ||| |||||| | || || |||||
Sbjct 372402 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372343
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| ||||||
Sbjct 372342 CATCCAGAAAGAGTCCACC 372324
Score = 84.2 bits (92), Expect = 2e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || || || | ||||| || || |||| || || || || |||
Sbjct 372750 GATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCCAG 372691
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| ||| | || | |||| || || |||||||||||||| || || || || ||
Sbjct 372690 TGACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCA 372631
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| | | || || || || |||||| | || ||| |||||| | || || |||||
Sbjct 372630 GCAGAGGTTGATCTTCGCTGGGAAACAGCTGGAAGATGGTCGCACCCTGTCTGACTACAA 372571
Query 22398 CATTCAAAAAGAATCCACC 22416
||| || ||||| ||||||
Sbjct 372570 CATCCAGAAAGAGTCCACC 372552
>seq1701
Length=366390
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| |||||||||||||| |||||||| || | | |||||| || ||||| ||||||
Sbjct 285491 AAAATCCAAGACAAGGAGGGCATTCCACCTGACTAGCCACGTCTGATGTTTGCGGGCAAA 285550
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| | ||| | || || ||||||| || || || |||||| | ||
Sbjct 285551 CAGCTGGAGGATGGCTACACTCTTTCAGACTACAACAGCCAGAAGGAGTCCACCCTGCAC 285610
Query 22423 TTAGT 22427
|| ||
Sbjct 285611 TTGGT 285615
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| |||||||||||||| |||||||| || | | |||||| || ||||| ||||||
Sbjct 286185 AAAATCCAAGACAAGGAGGGCATTCCACCTGACTAGCCACGTCTGATGTTTGCGGGCAAA 286244
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
||| | |||||| | ||| | || || ||||||| || || || |||||| | ||
Sbjct 286245 CAGCTGGAGGATGGCTACACTCTTTCAGACTACAACAGCCAGAAGGAGTCCACCCTGCAC 286304
Query 22423 TTAGT 22427
|| ||
Sbjct 286305 TTGGT 286309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418809707801410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |