Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 163 5e-35
seq633 161 2e-34
seq9005 107 4e-18
seq1701 100 5e-16
seq4376 95.1 2e-14
seq11886 89.7 9e-13
seq234 86.0 1e-11
>seq1029
Length=469353
Score = 163 bits (180), Expect = 5e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | ||||||||||| |||||||| || || || || || | ||||||||
Sbjct 372769 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372828
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| ||||| ||||| || | || || ||||| || || ||||| |||||||||||
Sbjct 372829 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372888
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||||| |||||||||||| | || || || | ||||||||| ||
Sbjct 372889 ATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372948
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || |||||||| || || |||||||||
Sbjct 372949 CCGGTCAGGGTCTTCACAAAGATCTGCATT 372978
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | ||||||||||| |||||||| || || || || || | ||||||||
Sbjct 372085 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372144
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| ||||| ||||| || | || || ||||| || || ||||| |||||||||||
Sbjct 372145 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372204
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||||| ||| |||||||| | || || || | ||||||||| ||
Sbjct 372205 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372264
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| ||||| ||||||||
Sbjct 372265 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372293
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | ||||||||||| |||||||| || || || || || | ||||||||
Sbjct 372313 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372372
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| ||||| ||||| || | || || ||||| || || ||||| |||||||||||
Sbjct 372373 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372432
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||||| ||| |||||||| | || || || | ||||||||| ||
Sbjct 372433 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372492
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| ||||| ||||||||
Sbjct 372493 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372521
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | ||||||||||| |||||||| || || || || || | ||||||||
Sbjct 372541 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 372600
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| ||||| ||||| || | || || ||||| || || ||||| |||||||||||
Sbjct 372601 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGG 372660
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||||| ||| |||||||| | || || || | ||||||||| ||
Sbjct 372661 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372720
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| ||||| ||||||||
Sbjct 372721 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372749
Score = 159 bits (176), Expect = 6e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 68246 GCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCC 68305
||||| |||||||| || ||||||||||| || ||||| || || || || || | ||
Sbjct 371622 GCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCC 371681
Query 68306 ATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTT 68365
|||||| | ||| ||||| || || || | || || ||||| || || || || |||||
Sbjct 371682 ATCTTCCAGCTGTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTT 371741
Query 68366 GTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGAT 68425
|||||| ||||| ||||||||| ||| |||||||| | || || || | ||||||
Sbjct 371742 GTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGAT 371801
Query 68426 GGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || || |||||||| ||||| ||||||||
Sbjct 371802 GGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 371837
Score = 156 bits (172), Expect = 8e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | ||||||||||| |||||||| || || || || || | ||||||||
Sbjct 371857 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 371916
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| ||||| ||||| || | || || ||||| || || || || |||||||||||
Sbjct 371917 AGCTGTTTCCCAGCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGG 371976
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||||||| ||| |||||||| | || || || | ||||||||| ||
Sbjct 371977 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTG 372036
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| ||||| ||||||||
Sbjct 372037 CCGGTCAGGGTCTTCACGAAGATCTGCAT 372065
>seq633
Length=582679
Score = 161 bits (178), Expect = 2e-34
Identities = 170/223 (76%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||| ||| | ||||||||||| |||||||| ||||| || || || | ||||||||
Sbjct 204338 ACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 204397
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| |||||| || || || ||||| || || ||||| || || |||||||| || || ||
Sbjct 204398 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGG 204457
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
||||| ||||| || |||||||||||| | || ||||||| ||||||||| ||
Sbjct 204458 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 204517
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG--CTATTATA 68473
|| || || ||||| ||||| || |||||| || ||||| ||
Sbjct 204518 CCGGTCAGAGTCTTCACGAAAATTTGCATTTTGACCTATTTTA 204560
Score = 158 bits (174), Expect = 2e-33
Identities = 153/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
||||||||||| |||||||| || || || || || | |||||||| | |||||| ||
Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || ||||| || || ||||| || || |||||||| || || || ||||| |||||
Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204241
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
|| |||||||||||| | || ||||||| ||||||||| || || || ||||||
Sbjct 204242 ACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 204301
Query 68445 TTGACGAATATCTGCAT 68461
|| ||||| ||||||||
Sbjct 204302 TTCACGAAGATCTGCAT 204318
>seq9005
Length=82358
Score = 107 bits (118), Expect = 4e-18
Identities = 150/209 (72%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||| || |||||||||| |||| ||| || || || || || ||||| ||
Sbjct 12341 ACCAAGGACAGGGTGGACTCTTCCTGGACGTTGTAGTCTGAAAGAGTGTGGCCATCCTCC 12400
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || ||||| || || ||||| | ||| ||||| |||||||||||
Sbjct 12401 AGCTGTTTGCCCGCAAATATCAGATGCTGCTGGTCAGCTGGGATGCCCTCCTTGTCTTGG 12460
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
| || || ||||| || ||||||||| | || || | |||||||||||| ||
Sbjct 12461 ACTTTGGCGTTGACATTCTTGATGGTGTCACTGGGCTCGACCT-CAAGGTGATGGTCTTG 12519
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| | ||||| || || ||||||||
Sbjct 12520 CCCGTCAAGGTCTCCACAAAGATCTGCAT 12548
>seq1701
Length=366390
Score = 100 bits (110), Expect = 5e-16
Identities = 150/209 (72%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||| || ||| |||| || || || || || ||||| ||
Sbjct 285615 ACCAAGTGCAGGGTGGACTCCTTCTGGCTGTTGTAGTCTGAAAGAGTGTAGCCATCCTCC 285556
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || | | | | ||| ||||||||||| |||||||||||
Sbjct 285555 AGCTGTTTGCCCGCAAACATCAGACGTGGCTAGTCAGGTGGAATGCCCTCCTTGTCTTGG 285496
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| |||| | |||| ||||||| |||| | | || || | || ||||| ||
Sbjct 285495 AT-TTTGAC-TGACATTCTCGATGCTGTCACTGGGCTTGACCTCGAGGGAAATGGTCTTG 285438
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| | |||||||| || || || |||||
Sbjct 285437 CCCATCAGGGTCTTTACAAAGAT-TGCAT 285410
Score = 91.5 bits (100), Expect = 3e-13
Identities = 111/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || |||||||| || ||| |||| || || || || || ||||| ||
Sbjct 286309 ACCAAGTGCAGGGTGGACTCCTTCTGGCTGTTGTAGTCTGAAAGAGTGTAGCCATCCTCC 286250
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || | | | | ||| ||||||||||| |||||||||||
Sbjct 286249 AGCTGTTTGCCCGCAAACATCAGACGTGGCTAGTCAGGTGGAATGCCCTCCTTGTCTTGG 286190
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
|| |||| | |||| ||||||| ||||
Sbjct 286189 AT-TTTGAC-TGACATTCTCGATGCTGTC 286163
>seq4376
Length=192284
Score = 95.1 bits (104), Expect = 2e-14
Identities = 141/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTC 68321
|| || |||| || || ||||||||||| | || | |||||||| | |||||
Sbjct 63466 AGAGTCGACTTCTTCTGAATGTTATAATC----AAAGTACATCCATCTTCCAGTTGCTTG 63521
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || | |||||||| || || || ||||| |||||||| || || ||||| |||
Sbjct 63522 CCAGCAAAGGTCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCC 63581
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || | || || || | | ||| | || | ||||||| |||||||| |||
Sbjct 63582 TTTACATTTCCTATTGTATCCGAGGGTTCAATGTCAAGAATGATGGTCTTTCCCGTAAGG 63641
Query 68442 GTCTTGACGAATATCTGCAT 68461
|| || | ||| ||||||||
Sbjct 63642 GTTTTTATGAAAATCTGCAT 63661
>seq11886
Length=47820
Score = 89.7 bits (98), Expect = 9e-13
Identities = 146/209 (70%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || | ||||| ||| || ||||| || || ||||| || | ||| | |
Sbjct 26458 ACCAAGTGCAG-GCGGACTGTTTCTGTATGTTGTAGTCTGAGAGAGTGCAGCCACCCTGG 26516
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || | | | ||| || | || ||||| ||||| ||||| |||||||||||
Sbjct 26517 AGCTGTTTGTCCACAAGTATCAGACACTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 26576
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||| | || | ||||||| | ||| | | | ||||||||| ||
Sbjct 26577 ATTTTGGCTTTGGCATTCTTGGTGGTGTCACTGGGTTCACCCTTTAGGGTGATGGTCTTG 26636
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| | | |||||| | || ||||||||
Sbjct 26637 CCCATCAAGGTCTTCATAAAGATCTGCAT 26665
>seq234
Length=833466
Score = 86.0 bits (94), Expect = 1e-11
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 84453 AGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 84512
||||||||| |||||||||||| ||||| || ||||||| || |||||||||||||
Sbjct 790246 AGCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 790305
Query 84513 AGCCCCACATCGGGC 84527
|||||||| ||||||
Sbjct 790306 AGCCCCACGTCGGGC 790320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 919554348456080
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