Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05]
179,514 sequences; 3,187,660,572 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1029 98.7 8e-16
seq633 98.7 8e-16
seq5167 82.4 6e-11
>seq1029
Length=469353
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||| || || || ||| |||||| || ||||| |||
Sbjct 372097 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGTTTCCCA 372156
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | | ||| ||||| || || ||||| || ||||| ||||| ||
Sbjct 372157 GCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTG 372216
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| ||| ||||| || | ||| | || ||||||||||| ||
Sbjct 372217 ACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 372276
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 372277 TTCACGAAGATCTGCAT 372293
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||| || || || ||| |||||| || ||||| |||
Sbjct 372325 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGTTTCCCA 372384
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | | ||| ||||| || || ||||| || ||||| ||||| ||
Sbjct 372385 GCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTG 372444
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| ||| ||||| || | ||| | || ||||||||||| ||
Sbjct 372445 ACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 372504
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 372505 TTCACGAAGATCTGCAT 372521
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||| || || || ||| |||||| || ||||| |||
Sbjct 372553 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGTTTCCCA 372612
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | | ||| ||||| || || ||||| || ||||| ||||| ||
Sbjct 372613 GCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTG 372672
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| ||| ||||| || | ||| | || ||||||||||| ||
Sbjct 372673 ACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 372732
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 372733 TTCACGAAGATCTGCAT 372749
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||| || || || ||| |||||| || ||||| |||
Sbjct 372781 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGTTTCCCA 372840
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | | ||| ||||| || || ||||| || ||||| ||||| ||
Sbjct 372841 GCGAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTG 372900
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| ||||| || | ||| | || ||||||||||| ||
Sbjct 372901 ACGTTCTCGATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 372960
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||| ||||||||
Sbjct 372961 TTCACAAAGATCTGCAT 372977
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||| || || || ||| |||||| || ||||| |||
Sbjct 371869 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCCAGCTGTTTCCCA 371928
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | | ||| ||||| || || || || || ||||| ||||| ||
Sbjct 371929 GCGAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTG 371988
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| ||| ||||| || | ||| | || ||||||||||| ||
Sbjct 371989 ACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 372048
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 372049 TTCACGAAGATCTGCAT 372065
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| ||||||||||| || || || || |||||| || ||||| |||
Sbjct 371641 GTGGACTCTTTCTGAATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGTTTCCCA 371700
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| |||| | | ||| ||||| || || || || || ||||| ||||| ||
Sbjct 371701 GCAAAGATCAACCTCTGCTGGTCAGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTG 371760
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||| ||| ||||| || | ||| | || ||||||||||| ||
Sbjct 371761 ACGTTCTCAATGGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 371820
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 371821 TTCACGAAGATCTGCAT 371837
>seq633
Length=582679
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || ||||||||||| | ||| || |||||| || || || ||
Sbjct 204350 GTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204409
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||||||||| || ||||| ||
Sbjct 204410 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204469
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||||||||||||
Sbjct 204470 ACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGAGTC 204529
Query 114366 TTTACAAAAATCTGCAT 114382
|| || ||||| |||||
Sbjct 204530 TTCACGAAAATTTGCAT 204546
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
|| || ||||| || |||||||| || | ||| || |||||| || || || ||
Sbjct 204122 GTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCT 204181
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||| | ||| ||||| || || ||||||||||| || ||||| ||
Sbjct 204182 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCCTGGATCTTGGCCTTC 204241
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| ||| || || |||| ||| | || ||||||||||| ||
Sbjct 204242 ACATTCTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 204301
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 204302 TTCACGAAGATCTGCAT 204318
>seq5167
Length=254018
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||| | ||||| || || | ||| | | || || || |||||||| || ||
Sbjct 220487 ACCACCATGAAGTCTAAACACAAGATGAAGATTTGACTCCTTCTGAATGTTATAGTCAGA 220546
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||||| ||||| |||||||| |||| || | || || || |||||
Sbjct 220547 CAAAGTACGTCCATCTTCCAGTTGCTTACCAGCAGAGATCAGTCTTTGCTGATCAGGAGG 220606
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| ||||| || || ||||| |||| | ||| | || || || ||| ||
Sbjct 220607 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCAAC 220666
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || || | | |||||||| |||||||||||
Sbjct 220667 CTCAAGAGTGATGGTCTTCCCCATAAAGGTTTTTACGAAAATCTGCAT 220714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419215218668568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |