Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galeopterus_20variegatus_20[refseq_20GCF_5F000696425.1_202014-06-05] 179,514 sequences; 3,187,660,572 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1401 84.2 4e-11 >seq1401 Length=405806 Score = 84.2 bits (92), Expect = 4e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| | || |||||| | || || || || || ||||||||||| | || || Sbjct 92225 GGGGAAAGGATTGTGGCCTTTGCTGCTGTTGAAGGAATTTTCTTCTCGGGATCTTTTGCT 92166 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||||| ||| ||| ||| | ||||| |||||||| || || || ||||| Sbjct 92165 GCTATATTCTGGCTAAAGAAGAGAGGACTT-ATGCCAGGACTCACTTTTTCCAATGAACT 92107 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 92106 CATCAGCAGAGATGA 92092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942220173660640